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PLM3_127_b2_sep16_scaffold_7938

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7938_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1..183
DNA (183bp) protein (61aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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261..1679
DNA (1419bp) protein (473aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
valyl-tRNA synthetase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1676..2872
DNA (1197bp) protein (399aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
valyl-tRNA synthetase (EC:6.1.1.9)
Suspect SCG annotation. See neighboring gene [PLM3_127_b2_sep16_scaffold_7938_2].
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_4
GWE2_Gammaproteobacteria_42_36_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3015..3269
DNA (255bp) protein (85aa)
Putative uncharacterized protein bin=GWE2_Gammaproteobacteria_42_36 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
hypothetical protein
Tax=GWE2_Gammaproteobacteria_42_36_curated
PLM3_127_b2_sep16_scaffold_7938_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3421..3858
DNA (438bp) protein (146aa)
hypothetical protein bin=bin1_lowGC species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3945..4670
DNA (726bp) protein (242aa)
lysophospholipase L1-like esterase bin=bin1_lowGC species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
lysophospholipase L1-like esterase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4953..6818
DNA (1866bp) protein (622aa)
Fe-S oxidoreductase bin=bin1_lowGC species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Fe-S oxidoreductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(7022..8290)
DNA (1269bp) protein (423aa)
purF; glutamine--phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
amidophosphoribosyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(8283..10493)
DNA (2211bp) protein (737aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] bin=bin1_lowGC species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7938_10
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10792..10962
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HAH7_ARTCA
Uncharacterized protein {ECO:0000313|EMBL:KGN32058.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
Displaying 10 items

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