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PLM3_127_b2_sep16_scaffold_1199

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1199_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(2..166)
DNA (165bp) protein (55aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
glutamyl-tRNA(Gln) amidotransferase subunit C
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1199_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(207..1181)
DNA (975bp) protein (325aa)
gshB; glutathione synthetase; K01920 glutathione synthase [EC:6.3.2.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
gshB; glutathione synthetase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1199_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1332..1583
DNA (252bp) protein (84aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

1913..2272
DNA (360bp) protein (120aa)
endonuclease V (EC:3.1.21.7)
Endonuclease V Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFU9_RHOMR
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1199_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2421..2876
DNA (456bp) protein (152aa)
dusP; dual specificity protein phosphatase (EC:3.1.3.16) bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
dual specificity protein phosphatase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3027..5162
DNA (2136bp) protein (712aa)
Indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] bin=bin1_lowGC species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5219..6820
DNA (1602bp) protein (534aa)
pyruvate/ketoisovalerate oxidoreductase; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] bin=bin1_lowGC species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
pyruvate/ketoisovalerate oxidoreductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6906..7433
DNA (528bp) protein (176aa)
adenylylsulfate kinase (EC:2.7.1.25); K00860 adenylylsulfate kinase [EC:2.7.1.25] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
adenylylsulfate kinase (EC:2.7.1.25)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_9
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(7482..12077)
DNA (4596bp) protein (1532aa)
glutamate synthase (EC:1.4.7.1)
glutamate synthase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B44CB8
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
PLM3_127_b2_sep16_scaffold_1199_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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12460..14145
DNA (1686bp) protein (562aa)
endopeptidase LytE (EC:3.4.-.-) bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
glycoside hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1199_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

14280..15152
DNA (873bp) protein (291aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
site-specific recombinase, XerC
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15127..15708
DNA (582bp) protein (194aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] bin=bin1_lowGC species=Thermotoga neapolitana genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
ATP-dependent protease hslV
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

15695..17026
DNA (1332bp) protein (444aa)
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hslU; ATP-dependent protease ATP-binding subunit HslU
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1199_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17047..18063)
DNA (1017bp) protein (339aa)
hypothetical protein; K04070 putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
radical SAM protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1199_15
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18483..18773
DNA (291bp) protein (97aa)
PF04365 family protein Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3UU41_9LEPT
ssr0757; hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3_127_b2_sep16_scaffold_1199_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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18757..18990
DNA (234bp) protein (78aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3_127_b2_sep16_scaffold_1199_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(19204..19392)
DNA (189bp) protein (63aa)
Cold shock protein Tax=Idiomarina sp. A28L RepID=F7RYB2_9GAMM
cold shock protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying 17 items

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