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PLM3_127_b2_sep16_scaffold_1317

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1317_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.51 6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
AMP-dependent synthetase and ligase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1317_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

633..1412
DNA (780bp) protein (260aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
F420-dependent oxidoreductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1454..2311)
DNA (858bp) protein (286aa)
UbiA prenyltransferase bin=bin1_lowGC species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
UbiA prenyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2418..3575
DNA (1158bp) protein (386aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
cysteine desulfurase NifS
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3653..4693)
DNA (1041bp) protein (347aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5065..6072
DNA (1008bp) protein (336aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6150..6767
DNA (618bp) protein (206aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin1_lowGC organism_group=Unknown_CP
pgk; phosphoglycerate kinase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

6903..7997
DNA (1095bp) protein (365aa)
fbaB; Fructose-1,6-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
fbaB; Fructose-1,6-bisphosphate aldolase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1317_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8010..8438)
DNA (429bp) protein (143aa)
EIF2Aa; initiation factor bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
EIF2Aa; initiation factor
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8715..9383
DNA (669bp) protein (223aa)
TENA/THI-4 family; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] bin=bin1_lowGC species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
TenA family transcription regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9380..10498)
DNA (1119bp) protein (373aa)
recF; recombination protein F; K03629 DNA replication and repair protein RecF bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
recombinase RecF
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10605..12725
DNA (2121bp) protein (707aa)
ATPase AAA (EC:3.6.4.6); K13525 transitional endoplasmic reticulum ATPase bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ATPase AAA (EC:3.6.4.6)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13000..13599
DNA (600bp) protein (200aa)
type 4 prepilin-like proteins leader peptide processing enzyme; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
type 4 prepilin-like proteins leader peptide processing enzyme
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13649..15139
DNA (1491bp) protein (497aa)
integral membrane sensor signal transduction histidine kinase bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sensor histidine kinase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15132..16487
DNA (1356bp) protein (452aa)
two component sigma-54 specific Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sigma-54-dependent transcriptional response regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1317_16
unknown

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comp(16629..16961)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI0003707F15
hypothetical protein
PLM3_127_b2_sep16_scaffold_1317_17
unknown

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17464..17772
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1317_18
unknown

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comp(18288..18539)
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 18 items

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