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PLM3_127_b2_sep16_scaffold_8436

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8436_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103..447)
DNA (345bp) protein (115aa)
mRNA interferase Tax=gamma proteobacterium HdN1 RepID=E1VLV8_9GAMM
PemK-like protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_8436_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(462..722)
DNA (261bp) protein (87aa)
Ribbon-helix-helix domain protein Tax=Leptospira interrogans serovar Valbuzzi RepID=M5ZA99_LEPIR
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_8436_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

888..1778
DNA (891bp) protein (297aa)
alkanal monooxygenase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1911..2252
DNA (342bp) protein (114aa)
membrane protein of unknown function; K08972 putative membrane protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2445..3179
DNA (735bp) protein (245aa)
fabG5; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
fabG5; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(3424..4476)
DNA (1053bp) protein (351aa)
Vinylacetyl-CoA delta-isomerase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIT2_METPP
4-hydroxyphenylacetate 3-hydroxylase hbab
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_7
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4494..4931)
DNA (438bp) protein (146aa)
Transposase IS200-family protein Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SQG6_THEAH
transposase IS200-family protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM3_127_b2_sep16_scaffold_8436_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(4999..5400)
DNA (402bp) protein (134aa)
4-hydroxyphenylacetate 3-hydroxylase family protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z8Z1_9GAMM
vinylacetyl-CoA delta-isomerase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6001..7392)
DNA (1392bp) protein (464aa)
hypothetical protein bin=bin1_lowGC species=Amycolicicoccus subflavus genus=Amycolicicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7607..7810)
DNA (204bp) protein (68aa)
DMT family permease; K08978 putative membrane protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
DMT family permease
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7839..7982)
DNA (144bp) protein (48aa)
DMT family permease; K08978 putative membrane protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8206..8478
DNA (273bp) protein (91aa)
competence protein ComEA helix-hairpin-helix repeat protein; K02237 competence protein ComEA bin=bin1_lowGC species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
comEA; competence protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8856..9911
DNA (1056bp) protein (352aa)
ald; alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] bin=bin1_lowGC species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
ald; alanine dehydrogenase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10044..10856
DNA (813bp) protein (271aa)
yfiO; outer membrane protein assembly lipoprotein YfiO; K05807 putative lipoprotein bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10853..11302
DNA (450bp) protein (150aa)
id=14424949 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11310..11672)
DNA (363bp) protein (121aa)
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
TraR/DksA family transcriptional regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

11815..12477
DNA (663bp) protein (221aa)
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] bin=bin1_lowGC species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
prmA; 50S ribosomal protein L11 methyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12608..13600
DNA (993bp) protein (331aa)
aIF-2BI family translation initiation factor (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13601..14104)
DNA (504bp) protein (168aa)
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
TraR/DksA family transcriptional regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_20
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(14417..15202)
DNA (786bp) protein (262aa)
Aspartyl/asparaginyl beta-hydroxylase Tax=uncultured Bacteroidetes bacterium RepID=H5SGI0_9BACT
aspartyl/asparaginyl beta-hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_21
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(15230..16549)
DNA (1320bp) protein (440aa)
glucose-1-phosphate thymidylyl transferase (EC:2.7.7.24) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_22
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(16554..17327)
DNA (774bp) protein (258aa)
nucleotidyltransferase family protein bin=bin1_lowGC species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
nucleotidyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_8436_23
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17649..18038)
DNA (390bp) protein (130aa)
panD; aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] bin=bin1_lowGC species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
panD; aspartate 1-decarboxylase (EC:4.1.1.11)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_8436_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(18052..18171)
DNA (120bp) protein (40aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] bin=bin1_lowGC species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Tax=CSP1_2_Dadabacteria
Displaying 24 items

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