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PLM3_127_b2_sep16_scaffold_670

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_670_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
panD; aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] bin=bin1_lowGC species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
panD; aspartate 1-decarboxylase (EC:4.1.1.11)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(325..498)
DNA (174bp) protein (58aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] bin=bin1_lowGC species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(495..1046)
DNA (552bp) protein (184aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] bin=bin1_lowGC species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
Pantothenate synthetase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1085..1882)
DNA (798bp) protein (266aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] bin=bin1_lowGC species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
3-methyl-2-oxobutanoatehydroxymethyltransferase (EC:2.1.2.11)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2172..2462)
DNA (291bp) protein (97aa)
XRE family transcriptional regulator Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELP1_9RHOB
XRE family transcriptional regulator {ECO:0000313|EMBL:ESW61953.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
XRE family plasmid maintenance system antidote protein
PLM3_127_b2_sep16_scaffold_670_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2474..2764)
DNA (291bp) protein (97aa)
Plasmid maintenance system killer Tax=Novosphingobium sp. PP1Y RepID=F6IBU0_9SPHN
plasmid maintenance system killer protein
Plasmid maintenance system killer {ECO:0000313|EMBL:CCA89765.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
PLM3_127_b2_sep16_scaffold_670_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(3091..3804)
DNA (714bp) protein (238aa)
rare lipoprotein A; K03642 rare lipoprotein A bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
rare lipoprotein A
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(3824..4045)
DNA (222bp) protein (74aa)
Rare lipoprotein A Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTW5_DACSA
rare lipoprotein A
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

4310..5500
DNA (1191bp) protein (397aa)
class I and II aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] bin=bin1_lowGC species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical aminotransferase YfdZ
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(5551..9378)
DNA (3828bp) protein (1276aa)
hypothetical protein; K09800 hypothetical protein bin=bin1_lowGC species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9456..11288)
DNA (1833bp) protein (611aa)
surface antigen bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
surface antigen
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

11507..13720
DNA (2214bp) protein (738aa)
Lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] bin=bin1_lowGC species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
lytic transglycosylase catalytic
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13777..14427
DNA (651bp) protein (217aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] bin=bin1_lowGC species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=bin1_lowGC organism_group=Unknown_CP
N-glycosylase/DNA lyase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

14792..16222
DNA (1431bp) protein (477aa)
glu-trnagln amidotransferase suBunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit (EC:6.3.5.-)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_15
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16437..17699
DNA (1263bp) protein (421aa)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW44_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ71443.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
family 2 glycosyl transferase
PLM3_127_b2_sep16_scaffold_670_16
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17930..19141
DNA (1212bp) protein (404aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3_127_b2_sep16_scaffold_670_17

Not on your lists

19131..19949
DNA (819bp) protein (273aa)
Mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70)
Mannosyl-3-phosphoglycerate phosphatase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL64423.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_670_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

20266..21372
DNA (1107bp) protein (369aa)
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
carbamoyl phosphate synthase small subunit
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(21560..22018)
DNA (459bp) protein (153aa)
hypothetical protein; K09122 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(22167..23204)
DNA (1038bp) protein (346aa)
o-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative DNA-binding/iron metalloprotein/AP endonuclease
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_21
unknown

Not on your lists

23281..23502
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_670_22
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

23524..25422
DNA (1899bp) protein (633aa)
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC bin=bin1_lowGC species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
thiamine biosynthesis protein ThiC
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_23
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

25419..25829
DNA (411bp) protein (137aa)
id=14426113 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_670_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(25912..26919)
DNA (1008bp) protein (336aa)
TPR domain protein bin=bin1_lowGC species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
TPR domain protein, putative component of TonB system
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_670_25
unknown

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26986..27189
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_670_26
unknown

Not on your lists

27257..27493
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_670_27
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(27809..28324)
DNA (516bp) protein (172aa)
Rare lipoprotein A Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S241_DESTD
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ADY72984.1}; Flags: Precursor;; species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
Displaying 27 items

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