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PLM3_127_b2_sep16_scaffold_995

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_995_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(45..812)
DNA (768bp) protein (256aa)
beta-lactamase domain-containing protein; K06167 PhnP protein bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
beta-lactamase domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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911..2626
DNA (1716bp) protein (572aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
cell wall hydrolase/autolysin
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2908..3918
DNA (1011bp) protein (337aa)
group 1 glycosyl transferase bin=bin1_lowGC species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
group 1 glycosyl transferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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4271..5320
DNA (1050bp) protein (350aa)
NAD-dependent epimerase/dehydratase bin=GWC2_OP3_44_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
NAD-dependent epimerase/dehydratase
Tax=GWF2_WOR_2_43_52_curated
PLM3_127_b2_sep16_scaffold_995_5
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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5332..6654
DNA (1323bp) protein (441aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_16_RIF03_38_10_curated
PLM3_127_b2_sep16_scaffold_995_6
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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6651..7466
DNA (816bp) protein (272aa)
Methyltransferase type 12 bin=GWC1_OD1_38_17 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
type 12 methyltransferase
Tax=RBG_16_RIF03_38_10_curated
PLM3_127_b2_sep16_scaffold_995_7

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7473..8984
DNA (1512bp) protein (504aa)
Membrane protein involved in the export of O-antigen and teichoic acid Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BX40_ANAMD
Uncharacterized protein {ECO:0000313|EMBL:KKM94507.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein
PLM3_127_b2_sep16_scaffold_995_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9039..10793
DNA (1755bp) protein (585aa)
Methyltransferase FkbM family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BC2_SOLUE
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ABJ81644.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_127_b2_sep16_scaffold_995_9
CG_CP02_01, CG_CP02, Bacteria

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10786..11766
DNA (981bp) protein (327aa)
Glycosyl transferase, family 2 (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMA3_9BACT
glycosyl transferase, family 2
Tax=CG_CP02_01
PLM3_127_b2_sep16_scaffold_995_10
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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11825..12646
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z263_METPS
hypothetical protein
Tax=RBG_16_Elusimicrobia_66_12_curated
PLM3_127_b2_sep16_scaffold_995_11
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(12790..14295)
DNA (1506bp) protein (502aa)
membrane protein bin=bin1_lowGC species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin1_lowGC organism_group=Unknown_CP
membrane protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM3_127_b2_sep16_scaffold_995_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14560..15243
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|SAAS:SAAS00030493, ECO:0000313|EMBL:GAM11541.1}; EC=2.7.7.60 {ECO:0000256|SAAS:SAAS00030493};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
pyrophosphorylase Tax=Hippea alviniae RepID=UPI0003B5C955
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PLM3_127_b2_sep16_scaffold_995_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(15376..17328)
DNA (1953bp) protein (651aa)
hyuA; N-methylhydantoinase A; K01473 N-methylhydantoinase A [EC:3.5.2.14] bin=bin1_lowGC species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
hyuA; N-methylhydantoinase A
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17604..17813)
DNA (210bp) protein (70aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA-directed RNA polymerase subunit omega
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

18117..18842
DNA (726bp) protein (242aa)
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] bin=bin1_lowGC species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
phosphoribosyl-ATP diphosphatase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_995_16
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(18867..19349)
DNA (483bp) protein (161aa)
FmdB family regulatory protein bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_995_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(19363..19866)
DNA (504bp) protein (168aa)
id=14425559 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_995_18
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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20147..20938
DNA (792bp) protein (264aa)
enoyl-CoA hydratase/isomerase bin=bin1_lowGC species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_995_19
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(21009..21392)
DNA (384bp) protein (128aa)
S23 ribosomal protein Tax=Calothrix sp. PCC 6303 RepID=K9V0V8_9CYAN
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AFZ01738.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
PLM3_127_b2_sep16_scaffold_995_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(21419..21682)
DNA (264bp) protein (88aa)
nitroreductase bin=bin1_lowGC species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
nitroreductase
Tax=CSP1_2_Dadabacteria
Displaying 20 items

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