ggKbase home page

PLM3_127_b2_sep16_scaffold_1635_6

Organism: PLM3_127_b2_sep16_Dadabacteria_40_8

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(5321..5899)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase catalytic subunit bin=bin1_lowGC species=Geovibrio thiophilus genus=Geovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 158.0
  • Bit_score: 163
  • Evalue 1.30e-37
transglycosylase slt domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 106
  • Evalue 5.20e-21
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 155.0
  • Bit_score: 164
  • Evalue 1.00e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Dadabacteria_53_21 → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 579
TTGATAAACCTAGGTAAATATAATAAGATTAAATTAATTCTAAGGTCTAAGAATCTTGCAATAATTATCTCGTTTGTTCTTTTTTTTATCCCATTTCTTTCAGGTCTAAGGTTTATACTTAGATTTTCGGAGGATTTAACCAGACCTCAGGCGACGAAACTGGCTAAGACAATAATTGAAGAATGCGATCAGTACGATTTGGATCCCTTTCTTATTCTTGCCGTGATACAGATTGAAAGCAACTTTTCCCCAAAGGCGGTTTCGAATAAAGGAGCGAGAGGGCTGATGCAGGTAACACCATCAACGGCAGGGTATTTGGCTGAAAAACTGGGTATCTCCATAAGGGGGAATAGATCACTCCATGACCCTTTTTTAAATGTGAGGTTAGGTATCTATTACCTTTCATTACTACAGGACAGGTTTAAGAATATTGAGCATGCGCTTTTGGCATACAACGTTGGTCCAGGCAAATTTGAAGAATATAAAGACCAGGGTATCTTAGCGTCTTCGTATTCAAAGAGAGTTCTTAAATTTAAAAAGCTGCTGAACAATGAAAGGTTGATATTTGAAAACGGCTGA
PROTEIN sequence
Length: 193
LINLGKYNKIKLILRSKNLAIIISFVLFFIPFLSGLRFILRFSEDLTRPQATKLAKTIIEECDQYDLDPFLILAVIQIESNFSPKAVSNKGARGLMQVTPSTAGYLAEKLGISIRGNRSLHDPFLNVRLGIYYLSLLQDRFKNIEHALLAYNVGPGKFEEYKDQGILASSYSKRVLKFKKLLNNERLIFENG*