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PLM3_127_b2_sep16_scaffold_1635

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1635_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(58..1614)
DNA (1557bp) protein (519aa)
WD40-like Beta Propeller Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
TolB-related protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_127_b2_sep16_scaffold_1635_2
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

2506..2781
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9701 RepID=I4IT75_MICAE
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_127_b2_sep16_scaffold_1635_3
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

2765..2974
DNA (210bp) protein (70aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWC2_Nitrospirae_42_7_curated
PLM3_127_b2_sep16_scaffold_1635_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3145..4206)
DNA (1062bp) protein (354aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01501 nitrilase [EC:3.5.5.1] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4325..5242)
DNA (918bp) protein (306aa)
luciferase-like protein bin=bin1_lowGC species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
luciferase-like protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(5321..5899)
DNA (579bp) protein (193aa)
lytic transglycosylase catalytic subunit bin=bin1_lowGC species=Geovibrio thiophilus genus=Geovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP
transglycosylase slt domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1635_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7035..8738
DNA (1704bp) protein (568aa)
protein translocase subunit YidC; K03217 preprotein translocase subunit YidC bin=bin1_lowGC species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
60 kDa inner membrane insertion protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8698..9381
DNA (684bp) protein (228aa)
single-stranded nucleic acid binding R3H domain-containing protein bin=bin1_lowGC species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
single-stranded nucleic acid binding R3H domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9428..9742
DNA (315bp) protein (105aa)
hypothetical protein bin=bin1_lowGC species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9746..10207)
DNA (462bp) protein (154aa)
cytosine deaminase bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
cytosine deaminase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10234..11961)
DNA (1728bp) protein (576aa)
ditJ; DitJ-like CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] bin=bin1_lowGC species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ditJ; DitJ-like CoA ligase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_12
GWD1_OD1_43_18, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(12233..12445)
DNA (213bp) protein (71aa)
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Uncharacterized protein {ECO:0000313|EMBL:KKT03361.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWD1_43_18.;"
PLM3_127_b2_sep16_scaffold_1635_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12438..12722)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FFH7_9BACT
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
PLM3_127_b2_sep16_scaffold_1635_14
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(13203..14930)
DNA (1728bp) protein (576aa)
ditJ; DitJ-like CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] bin=bin1_lowGC species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ditJ; DitJ-like CoA ligase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM3_127_b2_sep16_scaffold_1635_15
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(14938..15513)
DNA (576bp) protein (192aa)
Glutamine amidotransferase of anthranilate synthase bin=GWF2_Nitrospirae_44_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
anthranilate synthase component II
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1635_16
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(15571..17064)
DNA (1494bp) protein (498aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase, catalytic subunit bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1635_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

17168..18532
DNA (1365bp) protein (455aa)
phosphomannomutase Tax=Thermodesulfatator atlanticus RepID=UPI0003B5A2DD
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1635_18

Not on your lists

18569..20038
DNA (1470bp) protein (490aa)
Pyridine nucleotide-disulphide oxidoreductase Tax=planctomycete KSU-1 RepID=I3IIZ8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM71524.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component
PLM3_127_b2_sep16_scaffold_1635_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

20213..21052
DNA (840bp) protein (280aa)
major intrinsic protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
major intrinsic protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

21080..21493
DNA (414bp) protein (138aa)
id=14426682 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1635_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21593..21937
DNA (345bp) protein (115aa)
protein of unknown function DUF336
Uncharacterized protein {ECO:0000313|EMBL:AHG89412.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein bin=bin3_NC10 species=Methylosinus sp. LW4 genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
PLM3_127_b2_sep16_scaffold_1635_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

21966..22274
DNA (309bp) protein (103aa)
protein of unknown function DUF336
hypothetical protein bin=bin3_NC10 species=Methylosinus sp. LW4 genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_1635_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists

22412..22906
DNA (495bp) protein (165aa)
hypothetical protein bin=bin3_NC10 species=Methylosinus sp. LW4 genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
protein of unknown function DUF336
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_1635_24
CSP1_5_NC10, NC10, Bacteria

Not on your lists

22903..24558
DNA (1656bp) protein (552aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17] bin=bin3_NC10 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin3_NC10 organism_group=NC10
SMP-30/Gluconolaconase/LRE-like region-containing protein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_1635_25
unknown

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24685..24795
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1635_26
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

24828..25241
DNA (414bp) protein (138aa)
Peptide methionine sulfoxide reductase MsrB Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUR6_CHLT3
methionine-R-sulfoxide reductase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3_127_b2_sep16_scaffold_1635_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25261..26220)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKB1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 27 items

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