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PLM3_127_b2_sep16_scaffold_5243

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5243_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..537)
DNA (537bp) protein (179aa)
Putative hydratase Tax=alpha proteobacterium BAL199 RepID=A8TT29_9PROT
Putative hydratase {ECO:0000313|EMBL:EDP64003.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
fumarylacetoacetate (FAA) hydrolase
PLM3_127_b2_sep16_scaffold_5243_2
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(571..1551)
DNA (981bp) protein (327aa)
Phosphoglycerate dehydrogenase Tax=alpha proteobacterium BAL199 RepID=A8TIE8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJR61790.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
serA; phosphoglycerate dehydrogenase
PLM3_127_b2_sep16_scaffold_5243_trna_1
unknown

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comp(1631..1714)
DNA (84bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_5243_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1829..2872
DNA (1044bp) protein (348aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Methylovorus sp. (strain MP688) RepID=E4QLN6_METS6
queA; s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_5243_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2875..3978
DNA (1104bp) protein (368aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AMI3_9PROT
PLM3_127_b2_sep16_scaffold_5243_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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4374..4706
DNA (333bp) protein (111aa)
Putative Preprotein translocase subunit YajC Tax=Methyloversatilis universalis FAM5 RepID=F5R7F8_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_5243_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4762..6624
DNA (1863bp) protein (621aa)
Protein translocase subunit SecD Tax=Sulfuricella denitrificans skB26 RepID=S6B677_9PROT
protein-export membrane protein, SecD/SecF family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_5243_7
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6663..7592
DNA (930bp) protein (310aa)
Protein-export membrane protein SecF Tax=Nitrosospira sp. APG3 RepID=M5DJU1_9PROT
protein-export membrane protein SecF
Tax=RBG_16_Gamma2_64_11_curated
PLM3_127_b2_sep16_scaffold_5243_8
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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7608..8246
DNA (639bp) protein (213aa)
Putative membrane protein Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D5X4_LARHH
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACO74005.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
PLM3_127_b2_sep16_scaffold_5243_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8257..9630)
DNA (1374bp) protein (458aa)
Adenylosuccinate lyase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJ60_NITSI
adenylosuccinate lyase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_5243_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9692..10324
DNA (633bp) protein (211aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000317FD16
Uncharacterized protein {ECO:0000313|EMBL:KGM53828.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
uracil-DNA glycosylase
PLM3_127_b2_sep16_scaffold_5243_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10358..11455)
DNA (1098bp) protein (366aa)
tRNA-specific 2-thiouridylase MnmA Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDD9_NITSI
tRNA-specific 2-thiouridylase mnmA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_5243_12
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11469..11915)
DNA (447bp) protein (149aa)
NUDIX hydrolase Tax=Sulfuricella denitrificans skB26 RepID=S6AJ97_9PROT
NUDIX hydrolase
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
PLM3_127_b2_sep16_scaffold_5243_13
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11925..12359)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Methylotenera sp. 1P/1 RepID=UPI00037EDC36
multiple antibiotic resistance (MarC)-like protein
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
Displaying 14 items

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