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PLM3_127_b2_sep16_scaffold_2711

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2711_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
hypothetical protein; K06888 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thioredoxin domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2711_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294..1757)
DNA (1464bp) protein (488aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Nitrosospira sp. APG3 RepID=M5DIA8_9PROT
carboxylyase-like protein
PLM3_127_b2_sep16_scaffold_2711_3
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1771..2544)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR Tax=Burkholderia sp. SJ98 RepID=K8R2Y9_9BURK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKS67869.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
PLM3_127_b2_sep16_scaffold_2711_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2606..3478)
DNA (873bp) protein (291aa)
4-hydroxybenzoate octaprenyltransferase Tax=uncultured beta proteobacterium RepID=Q2Z0B7_9PROT
ubiA; 4-hydroxybenzoate polyprenyl transferase
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_2711_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3492..3935)
DNA (444bp) protein (148aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=Sulfuricella denitrificans skB26 RepID=S6ACT1_9PROT
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_2711_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4080..6263)
DNA (2184bp) protein (728aa)
ATP-dependent DNA helicase RecG Tax=Sulfuricella denitrificans skB26 RepID=S6AEW0_9PROT
recG; ATP-dependent DNA helicase RecG
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_2711_7
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6399..6779)
DNA (381bp) protein (127aa)
endoribonuclease Tax=Methyloversatilis sp. NVD RepID=UPI00035F227F
endoribonuclease L-PSP
Tax=GWA2_Gallionellales_55_18_curated
PLM3_127_b2_sep16_scaffold_2711_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7000..8886
DNA (1887bp) protein (629aa)
Probable potassium transport system protein kup Tax=Sulfuricella denitrificans skB26 RepID=S6A9C4_9PROT
K+ transporter
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_2711_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8907..9239
DNA (333bp) protein (111aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037D1484
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
PLM3_127_b2_sep16_scaffold_2711_10
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..10083
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZBL1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89589.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2711_trna_1
unknown

Not on your lists

comp(10181..10253)
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_2711_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10635..11402
DNA (768bp) protein (256aa)
SapC family protein Tax=Burkholderia pseudomallei RepID=S5P1N1_BURPE
sapC family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_2711_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11399..11974)
DNA (576bp) protein (192aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase Tax=mine drainage metagenome RepID=E6QX85_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 13 items

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