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PLM3_127_b2_sep16_scaffold_2968

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2968_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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72..1442
DNA (1371bp) protein (457aa)
Putative transport protein Tax=Nitrosospira sp. APG3 RepID=M5DLK2_9PROT
Putative transport protein {ECO:0000313|EMBL:CCU63548.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
major facilitator superfamily protein
PLM3_127_b2_sep16_scaffold_2968_2
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1444..1905
DNA (462bp) protein (154aa)
Single-stranded DNA-binding protein Tax=Methylovorus sp. (strain MP688) RepID=E4QMN8_METS6
ssb; single-strand-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
PLM3_127_b2_sep16_scaffold_2968_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2036..5506
DNA (3471bp) protein (1157aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:EKE69523.1}; EC=1.2.7.8 {ECO:0000313|EMBL:EKE69523.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Indolepyruvate ferredoxin oxidoreductase Tax=Oceanibaculum indicum P24 RepID=K2J356_9PROT
pyruvate ferredoxin/flavodoxin oxidoreductase family protein
PLM3_127_b2_sep16_scaffold_2968_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5805..6659
DNA (855bp) protein (285aa)
Metallo-phosphoesterase protein Tax=Azoarcus sp. (strain BH72) RepID=A1K7K8_AZOSB
metallo-phosphoesterase
Metallo-phosphoesterase protein {ECO:0000313|EMBL:CAL94813.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM3_127_b2_sep16_scaffold_2968_5
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7011..7784)
DNA (774bp) protein (258aa)
membrane protein Tax=Burkholderia ubonensis RepID=UPI00016A3F72
glycerophosphoryl diester phosphodiesterase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_2968_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7914..8279
DNA (366bp) protein (122aa)
Putative regulatory protein, FmdB family Tax=Thioflavicoccus mobilis 8321 RepID=L0H0Z9_9GAMM
regulatory protein, FmdB family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_2968_7
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8279..8893
DNA (615bp) protein (205aa)
Transmembrane protein Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IV05_HERSS
hypothetical protein
Transmembrane protein {ECO:0000313|EMBL:ADJ61724.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
PLM3_127_b2_sep16_scaffold_2968_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8954..10756
DNA (1803bp) protein (601aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase Tax=Nitrosospira sp. APG3 RepID=M5DFP2_9PROT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KIO50283.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
PLM3_127_b2_sep16_scaffold_2968_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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10916..11374
DNA (459bp) protein (153aa)
Dihydroneopterin triphosphate pyrophosphatase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBG0_NITMU
ntpA; dATP pyrophosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_2968_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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11423..12520
DNA (1098bp) protein (366aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569, ECO:0000256|SAAS:SAAS00096027};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Quinolinate synthase A Tax=Nitrosospira sp. APG3 RepID=M5DI06_9PROT
quinolinate synthetase
PLM3_127_b2_sep16_scaffold_2968_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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13131..13883
DNA (753bp) protein (251aa)
Endonuclease/exonuclease/phosphatase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBF8_NITMU
endonuclease/exonuclease/phosphatase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_2968_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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13880..15043
DNA (1164bp) protein (388aa)
Phospholipase D/Transphosphatidylase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK61_ACCPU
phospholipase D/transphosphatidylase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_2968_13
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15365..15514)
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C5J9_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW27575.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
PLM3_127_b2_sep16_scaffold_2968_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15715..16686)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000372D739
ampC; beta-lactamase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_2968_15
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16683..17117)
DNA (435bp) protein (145aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RG82_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EGK70570.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2968_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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17334..18578
DNA (1245bp) protein (415aa)
Lipid A export ATP-binding/permease protein MsbA Tax=Nitrosospira sp. APG3 RepID=M5DFK6_9PROT
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 16 items

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