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PLM3_127_b2_sep16_scaffold_3421

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3421_1
unknown

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comp(559..1866)
DNA (1308bp) protein (436aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3421_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2408..2836
DNA (429bp) protein (143aa)
Ribosome maturation factor RimP Tax=Sulfuricella denitrificans skB26 RepID=S6ACF6_9PROT
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_3421_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2852..4336
DNA (1485bp) protein (495aa)
Transcription termination protein NusA Tax=Nitrosospira sp. APG3 RepID=M5DIM5_9PROT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
nusA; transcription elongation factor NusA
PLM3_127_b2_sep16_scaffold_3421_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4343..6901
DNA (2559bp) protein (853aa)
Translation initiation factor IF-2 Tax=Nitrosospira sp. APG3 RepID=M5DK83_9PROT
infB; translation initiation factor IF-2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_3421_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6970..7353
DNA (384bp) protein (128aa)
Ribosome-binding factor A Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RBFA_NITMU
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM3_127_b2_sep16_scaffold_3421_6
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7353..8321
DNA (969bp) protein (323aa)
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
tRNA pseudouridine synthase B Tax=Azoarcus sp. (strain BH72) RepID=TRUB_AZOSB
PLM3_127_b2_sep16_scaffold_3421_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8384..8653
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS15_NITMU
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_3421_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8806..10542
DNA (1737bp) protein (579aa)
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6B4K5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 8 items

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