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PLM3_127_b2_sep16_scaffold_3723

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3723_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
Protein smg homolog bin=GWC2_Elusimicrobia_51_8 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Protein smg
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_3723_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247..1320)
DNA (1074bp) protein (358aa)
DNA protecting protein DprA bin=GWC2_Elusimicrobia_51_8 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA processing protein DprA
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_3723_3
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1362..2438)
DNA (1077bp) protein (359aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035F9C52
peptidoglycan-binding lysin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_3723_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2549..3052
DNA (504bp) protein (168aa)
Peptide deformylase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHS3_AZOSU
peptide deformylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_3723_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3119..4045
DNA (927bp) protein (309aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI000364472B
fmt; methionyl-tRNA formyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_3723_6
unknown

Not on your lists

comp(4233..4421)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3723_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4822..5424
DNA (603bp) protein (201aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI00037A563C
ribosomal RNA small subunit methyltransferase RsmB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_3723_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5433..6005
DNA (573bp) protein (191aa)
Probable proline rich signal peptide protein Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46VS2_CUPPJ
proline rich signal peptide protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_3723_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6002..8113
DNA (2112bp) protein (704aa)
Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHR6_AZOSU
signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_3723_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8120..9364
DNA (1245bp) protein (415aa)
Two component sigma-54 specific Fis family transcriptional regulator Tax=Thauera phenylacetica B4P RepID=N6ZV39_9RHOO
two component sigma-54 specific Fis family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_3723_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9425..10798
DNA (1374bp) protein (458aa)
TrkA-N domain protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
TrkA-N domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_3723_12
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10814..12271
DNA (1458bp) protein (486aa)
cation transporter; K03498 trk system potassium uptake protein TrkH bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cation transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_3723_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12438..12785)
DNA (348bp) protein (116aa)
COG0251: Putative translation initiation inhibitor, yjgF family bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_3723_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12809..13507)
DNA (699bp) protein (233aa)
Hydrolase Tax=Bordetella holmesii RepID=M5NQR6_9BORD
fumarylacetoacetate (FAA) hydrolase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_3723_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13721..14686)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003787F26
ammonia channel protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 15 items

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