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PLM3_127_b2_sep16_scaffold_4783

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4783_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..535
DNA (534bp) protein (178aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4783_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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627..1295
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE Tax=Sulfuricella denitrificans skB26 RepID=S6ANJ0_9PROT
cell division ATP-binding protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:BAN36439.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_4783_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1292..2197
DNA (906bp) protein (302aa)
Cell division protein FtsX Tax=Nitrosospira sp. APG3 RepID=M5DFG3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4783_4
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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2353..3315
DNA (963bp) protein (321aa)
Transposase Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD00_PHEZH
transposase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM3_127_b2_sep16_scaffold_4783_trna_1
unknown

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comp(3335..3447)
DNA (113bp)
transferRNA Pro
PLM3_127_b2_sep16_scaffold_4783_5
unknown

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comp(3576..3989)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4783_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4363..5226
DNA (864bp) protein (288aa)
RNA polymerase sigma factor RpoH Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5E3_NITMU
RNA polymerase factor sigma-32
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4783_7
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5289..5876)
DNA (588bp) protein (196aa)
photosynthetic protein synthase I Tax=Herbaspirillum seropedicae RepID=UPI00030A87BF
lipoprotein
Lipoprotein {ECO:0000313|EMBL:ADJ65621.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
PLM3_127_b2_sep16_scaffold_4783_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5890..6759)
DNA (870bp) protein (290aa)
Protoheme IX farnesyltransferase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=COXX_NITMU
protoheme IX farnesyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4783_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6981..7178
DNA (198bp) protein (66aa)
Putative uncharacterized protein bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
PLM3_127_b2_sep16_scaffold_4783_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7257..7445)
DNA (189bp) protein (63aa)
Cytochrome c oxidase polypeptide I {ECO:0000313|EMBL:CCU62193.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCU62193.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome c oxidase polypeptide I Tax=Nitrosospira sp. APG3 RepID=M5DIE0_9PROT
PLM3_127_b2_sep16_scaffold_4783_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..8371)
DNA (930bp) protein (310aa)
Cytochrome c oxidase subunit 2 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCN0_NITMU
cytochrome c oxidase subunit II
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying 12 items

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