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PLM3_127_b2_sep16_scaffold_1681

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1681_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..249
DNA (249bp) protein (83aa)
NIPSNAP family protein Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RUK7_9PROT
NIPSNAP family containing protein {ECO:0000313|EMBL:KGM34141.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
NIPSNAP family protein
PLM3_127_b2_sep16_scaffold_1681_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(908..1972)
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM15_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67901.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_1681_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1980..2618)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI00035D3E1F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67902.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_1681_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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2731..3570
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM14_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_1681_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3720..4460
DNA (741bp) protein (247aa)
hypothetical protein Tax=Sphingomonas melonis RepID=UPI00037EDE0B
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15817.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1681_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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4640..5743
DNA (1104bp) protein (368aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Marinobacter nanhaiticus D15-8W RepID=N6WRP7_9ALTE
PLM3_127_b2_sep16_scaffold_1681_7
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6070..6372)
DNA (303bp) protein (101aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7D2_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28809.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_127_b2_sep16_scaffold_1681_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6448..7419)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI0003823608
LysR family regulatory protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_1681_9
unknown

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comp(7541..8059)
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1681_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(8119..9075)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_127_b2_sep16_scaffold_1681_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9112..10383)
DNA (1272bp) protein (424aa)
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CDH44544.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
Putative membrane transport protein bin=GWB2_Desulfobacterales_56_26 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
PLM3_127_b2_sep16_scaffold_1681_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10380..10790)
DNA (411bp) protein (137aa)
Putative membrane protein Tax=Variovorax sp. CF313 RepID=J3CF22_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL70369.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1681_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11031..11897
DNA (867bp) protein (289aa)
DMT(Drug/metabolite transporter) superfamily permease Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFT4_AZOSU
DMT(drug/metabolite transporter) superfamily permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1681_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12008..12619
DNA (612bp) protein (204aa)
Transglycosylase SLT domain protein Tax=Nitrosospira sp. APG3 RepID=M5DG94_9PROT
lytic transglycosylase catalytic
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_1681_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12616..13218)
DNA (603bp) protein (201aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002D77FFA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1681_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13218..13697)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002EE9403
prepilin-type N-terminal cleavage/methylation domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1681_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13691..14125)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0003039B80
gspG; type II secretion system protein G
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1681_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14338..15996)
DNA (1659bp) protein (553aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00036D03DA
type II secretory pathway, component HofQ
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 18 items

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