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PLM3_127_b2_sep16_scaffold_1933

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1933_1
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..176)
DNA (174bp) protein (58aa)
3-hydroxylacyl-(Acyl carrier protein) dehydratase-like protein Tax=Burkholderia cenocepacia RepID=A0KAJ1_BURCH
Uncharacterized protein {ECO:0000313|EMBL:KDB10455.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
3-hydroxylacyl-(acyl carrier protein) dehydratase-like protein
PLM3_127_b2_sep16_scaffold_1933_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170..964)
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLK5_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_1933_3
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(961..2157)
DNA (1197bp) protein (399aa)
Beta-ketoacyl synthase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLK4_SIDLE
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ADE10592.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM3_127_b2_sep16_scaffold_1933_4
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2349..2624
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLK8_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE10596.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM3_127_b2_sep16_scaffold_1933_5
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2599..3288
DNA (690bp) protein (230aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
PLM3_127_b2_sep16_scaffold_1933_6
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3326..4984
DNA (1659bp) protein (553aa)
Beta-hydroxyacyl-ACP dehydratase Tax=Ralstonia sp. AU12-08 RepID=S9TAG7_9RALS
Beta-hydroxyacyl-ACP dehydratase {ECO:0000313|EMBL:KHK53703.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
putative enzyme; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases domain
PLM3_127_b2_sep16_scaffold_1933_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4981..5883
DNA (903bp) protein (301aa)
Lipid A biosynthesis acyltransferase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKD6_ACCPU
Acyl-CoA synthetase {ECO:0000313|EMBL:KJB92240.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
lipid A biosynthesis acyltransferase
PLM3_127_b2_sep16_scaffold_1933_8
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5903..6472
DNA (570bp) protein (190aa)
Putative transmembrane protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLM1_SIDLE
transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_1933_9
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6469..8823
DNA (2355bp) protein (785aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLM2_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE10610.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM3_127_b2_sep16_scaffold_1933_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8876..9643)
DNA (768bp) protein (256aa)
Family 2 glycosyl transferase Tax=Sulfuricella denitrificans skB26 RepID=S6ANT5_9PROT
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_1933_11
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9719..10561)
DNA (843bp) protein (281aa)
Phospholipid/glycerol acyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM02_SIDLE
phospholipid/glycerol acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_1933_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10640..11440)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00035F8C8D
outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_1933_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11512..12957)
DNA (1446bp) protein (482aa)
Putative oxidoreductase, FAD-binding Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608J6_METCA
Non-heme halogenase {ECO:0000313|EMBL:EWY41913.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
oxidoreductase, FAD-binding
PLM3_127_b2_sep16_scaffold_1933_14
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12984..13721
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWT6_HALNC
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM3_127_b2_sep16_scaffold_1933_15
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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13931..14746
DNA (816bp) protein (272aa)
Putative uncharacterized protein Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IXP6_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK77979.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
PLM3_127_b2_sep16_scaffold_1933_16
unknown

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14701..14982
DNA (282bp) protein (94aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00035FB304
PLM3_127_b2_sep16_scaffold_1933_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15027..15587
DNA (561bp) protein (187aa)
Elongation factor P Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=EFP_BORPD
efp; elongation factor P
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1933_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15988..16497
DNA (510bp) protein (170aa)
Aspartyl protease-like Tax=Nitrosospira sp. APG3 RepID=M5DH15_9PROT
Aspartyl protease {ECO:0000313|EMBL:GAO35938.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
aspartyl protease-like protein
PLM3_127_b2_sep16_scaffold_1933_trna_1
unknown

Not on your lists

comp(16770..16842)
DNA (73bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_1933_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16902..18134
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 Tax=Nitrosospira sp. APG3 RepID=M5DGZ0_9PROT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCU61744.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
major facilitator superfamily protein
PLM3_127_b2_sep16_scaffold_1933_20
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18431..20254
DNA (1824bp) protein (608aa)
ABC transporter-like protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9W5_9PROT
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_1933_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20297..21358
DNA (1062bp) protein (354aa)
Putative permease Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPI1_AZOSU
putative permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1933_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21879..22163
DNA (285bp) protein (95aa)
ATP-dependent RNA helicase RhlE Tax=Nitrosospira sp. APG3 RepID=M5DLT4_9PROT
DEAD/DEAH box helicase-like protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 23 items

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