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PLM3_127_b2_sep16_scaffold_74

Search features with annotation key words

Displaying items 31-60 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_74_31
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32567..32983)
DNA (417bp) protein (139aa)
Ribonuclease VapC Tax=Thauera phenylacetica B4P RepID=N6ZQ77_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_74_32
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32980..33261)
DNA (282bp) protein (94aa)
CopG family transcriptional regulator Tax=Thauera phenylacetica B4P RepID=N6YQU9_9RHOO
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_74_33
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33461..34159)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZJ8_HALHL
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_74_34
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34170..34766)
DNA (597bp) protein (199aa)
Isoprenylcysteine carboxyl methyltransferase Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZJ7_HALHL
isoprenylcysteine carboxyl methyltransferase
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
PLM3_127_b2_sep16_scaffold_74_35
unknown

Not on your lists

comp(34766..34951)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_74_36
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35062..36234
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing enzyme family protein Tax=alpha proteobacterium BAL199 RepID=A8TLQ6_9PROT
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:EDP66136.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative mandelate racemase/muconate lactonizing enzyme family protein
PLM3_127_b2_sep16_scaffold_74_37
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36306..37424)
DNA (1119bp) protein (373aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Cobalamin-independent methionine synthase)-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y207_RAMTT
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_74_38
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37560..38732
DNA (1173bp) protein (391aa)
ABC transporter substrate-binding protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002E33A28
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:EIJ46359.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
branched-chain amino acid ABC transporter periplasmic protein
PLM3_127_b2_sep16_scaffold_74_39
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38984..40615
DNA (1632bp) protein (544aa)
peptide chain release factor 3 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036C5179
prfC; peptide chain release factor 3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_74_40
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40834..41781)
DNA (948bp) protein (316aa)
2-nitropropane dioxygenase Tax=Methylobacterium sp. WSM2598 RepID=UPI000366DEFC
putative nitronate monooxygenase
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_74_41

Not on your lists

42138..42386
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Pseudomonas protegens RepID=Q4K3D5_PSEF5
Marine sediment metagenome DNA, contig: S01H1_L09253 {ECO:0000313|EMBL:GAF99169.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_74_42
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42828..43421
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH35_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK52073.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
PLM3_127_b2_sep16_scaffold_74_43
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43528..44232
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDY1_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_74_44

Not on your lists

44607..45206
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2F5_GEODF
Uncharacterized protein {ECO:0000313|EMBL:KKM16297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_74_45
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45351..45992
DNA (642bp) protein (214aa)
17 kDa surface antigen Tax=Sulfuricella denitrificans skB26 RepID=S6B0P4_9PROT
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:BAN34252.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_74_46
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46161..49013
DNA (2853bp) protein (951aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI00036CBFA6
pepN; aminopeptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_74_47
unknown

Not on your lists

49121..49234
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_74_48
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49293..49655
DNA (363bp) protein (121aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Arsenate reductase Tax=Pontibacter sp. BAB1700 RepID=J0V2H3_9BACT
arsC; arsenate reductase
PLM3_127_b2_sep16_scaffold_74_49
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49849..50733
DNA (885bp) protein (295aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_74_50
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(50744..51508)
DNA (765bp) protein (255aa)
Phytanoyl-CoA dioxygenase Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SWX0_PLAL2
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ADG67470.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
PLM3_127_b2_sep16_scaffold_74_51
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51657..52712)
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=Elioraea tepidiphila RepID=UPI00037F2CF6
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_74_52
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52709..54544)
DNA (1836bp) protein (612aa)
ferredoxin oxidoreductase Tax=Bradyrhizobium elkanii RepID=UPI0003681D82
ferredoxin oxidoreductase subunit alpha
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_74_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54526..56334)
DNA (1809bp) protein (603aa)
glutamate synthase Tax=Rudaea cellulosilytica RepID=UPI00037D3496
4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_74_54
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56620..57861)
DNA (1242bp) protein (414aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ACE4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO36373.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_74_55
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58032..58694)
DNA (663bp) protein (221aa)
OmpA/MotB domain protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABV4_ALKEH
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABI55683.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM3_127_b2_sep16_scaffold_74_56
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58842..59444)
DNA (603bp) protein (201aa)
Haloacid dehalogenase Tax=Rhodanobacter fulvus Jip2 RepID=I4VK80_9GAMM
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_74_57
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59454..60170)
DNA (717bp) protein (239aa)
Dimethylmenaquinone methyltransferase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCQ3_NOCSJ
hypothetical protein
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:ABL79588.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_127_b2_sep16_scaffold_74_58
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60286..61776
DNA (1491bp) protein (497aa)
Thiol oxidoreductase Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T4B2_JANMA
thiol oxidoreductase
Thiol oxidoreductase {ECO:0000313|EMBL:ABR89512.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
PLM3_127_b2_sep16_scaffold_74_59
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61975..63210)
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WS31_VEREI
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABM60438.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
PLM3_127_b2_sep16_scaffold_74_60
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63465..63857)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7ZF06_BDEBC
Uncharacterized protein {ECO:0000313|EMBL:KHD87652.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
hypothetical protein
Displaying items 31-60 of 143 in total

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