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PLM3_127_b2_sep16_scaffold_215

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_215_31
R_OD1_Yanofskybacteria_49_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(34149..35075)
DNA (927bp) protein (309aa)
conserved exported protein of unknown function
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_17_curated
PLM3_127_b2_sep16_scaffold_215_32
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35697..36620
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Loktanella vestfoldensis SKA53 RepID=A3V7W5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ05765.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_215_33
unknown

Not on your lists

comp(36612..36758)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_34
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36766..37737
DNA (972bp) protein (324aa)
hypothetical protein Tax=Endozoicomonas elysicola RepID=UPI00036272ED
Epoxide hydrolase {ECO:0000313|EMBL:ETW95365.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative epoxide hydrolase
PLM3_127_b2_sep16_scaffold_215_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37852..40167)
DNA (2316bp) protein (772aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00038204FB
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_36
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40434..40961)
DNA (528bp) protein (176aa)
CHR transporter Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHX2_METPP
Chromate transport protein {ECO:0000313|EMBL:EWS55515.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
chrA; CHR transporter
PLM3_127_b2_sep16_scaffold_215_37
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40970..41569)
DNA (600bp) protein (200aa)
CHR transporter Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHX1_METPP
chrA; CHR transporter
CHR transporter {ECO:0000313|EMBL:ABM95160.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
PLM3_127_b2_sep16_scaffold_215_38
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41759..42418)
DNA (660bp) protein (220aa)
hypothetical protein; K09915 hypothetical protein bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_215_39
unknown

Not on your lists

comp(42415..42504)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_40
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42582..43040)
DNA (459bp) protein (153aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000371389F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_215_41
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43150..44082)
DNA (933bp) protein (311aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase Tax=alpha proteobacterium BAL199 RepID=A8TNA6_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_215_42
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44464..45564
DNA (1101bp) protein (367aa)
Gluconate dehydratase {ECO:0000313|EMBL:CDY78469.1}; EC=4.2.1.39 {ECO:0000313|EMBL:CDY78469.1};; L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KDR41313.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
Mandelate racemase/muconate lactonizing protein Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JT64_BURP8
mandelate racemase/muconate lactonizing protein
PLM3_127_b2_sep16_scaffold_215_43
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45741..46532
DNA (792bp) protein (264aa)
aldolase Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI00036D6633
aldolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_215_44
unknown

Not on your lists

47018..47455
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_45
unknown

Not on your lists

comp(47535..47975)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_46
unknown

Not on your lists

48490..48675
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_47
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48842..49357)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5E6K1_NOCAS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_215_48
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49468..50613)
DNA (1146bp) protein (382aa)
mandelate racemase Tax=alpha proteobacterium SCGC AAA536-K22 RepID=UPI0003B37515
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:EHI49443.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
Mandelate racemase/muconate lactonizing protein
PLM3_127_b2_sep16_scaffold_215_49
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50725..51165
DNA (441bp) protein (147aa)
Universal stress protein Tax=Thauera RepID=C4ZLY8_THASP
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ACK54043.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
PLM3_127_b2_sep16_scaffold_215_50
unknown

Not on your lists

comp(51196..51504)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_trna_1
unknown

Not on your lists

comp(51601..51673)
DNA (73bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_215_51
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51985..52767)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZC6_PARL1
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS65259.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_127_b2_sep16_scaffold_215_52
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52847..53638
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJR63588.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJR63588.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
paaG; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=Azospirillum sp. (strain B510) RepID=D3P5Q3_AZOS1
PLM3_127_b2_sep16_scaffold_215_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53645..54073)
DNA (429bp) protein (143aa)
Ferric uptake regulator family protein Tax=Sulfuricella denitrificans skB26 RepID=S6AMB7_9PROT
ferric uptake regulator family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_54
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54490..54951
DNA (462bp) protein (154aa)
Type IV pilus biogenesis protein PilE Tax=Sulfuricella denitrificans skB26 RepID=S6AI82_9PROT
type IV pilus biogenesis protein PilE
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_215_55
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54945..55475
DNA (531bp) protein (177aa)
General secretion pathway protein H Tax=Sulfuricella denitrificans skB26 RepID=S6B5X9_9PROT
general secretion pathway protein H
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_215_56
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55501..55935
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ACW6_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35933.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_215_57
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55956..57071
DNA (1116bp) protein (372aa)
Type IV pilus assembly protein PilW Tax=Sulfuricella denitrificans skB26 RepID=S6AMC0_9PROT
type IV pilus assembly protein PilW
Type IV pilus assembly protein PilW {ECO:0000313|EMBL:BAN35934.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_215_58
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57074..57703
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AAI8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35935.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_215_59
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57737..61807
DNA (4071bp) protein (1357aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AI86_9PROT
Neisseria PilC protein {ECO:0000313|EMBL:GAO34150.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
Displaying items 31-60 of 62 in total

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