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PLM3_127_b2_sep16_scaffold_215

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_215_1
unknown

Not on your lists

1..114
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..1087)
DNA (942bp) protein (314aa)
Put. Gluconate kinase Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I884_BORPD
carbohydrate kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_215_3
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1090..1728)
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:KCB36512.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KCB36512.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KCB36512.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
4-Hydroxy-2-oxoglutarate aldolase (EC:4.1.2.14 4.1.3.16)
4-Hydroxy-2-oxoglutarate aldolase Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XKY7_ALCXX
PLM3_127_b2_sep16_scaffold_215_4
unknown

Not on your lists

comp(1988..2122)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2119..2382)
DNA (264bp) protein (88aa)
RNP-1 like RNA-binding protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPV6_ACCPU
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_6
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2462..3757)
DNA (1296bp) protein (432aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
hypothetical protein, partial Tax=Cupriavidus sp. WS RepID=UPI000366F0D9
DEAD/DEAH box helicase
PLM3_127_b2_sep16_scaffold_215_7
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4591..5949
DNA (1359bp) protein (453aa)
Hypothetical secreted protein Tax=Azoarcus sp. (strain BH72) RepID=A1K7Q9_AZOSB
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:CAL94864.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM3_127_b2_sep16_scaffold_215_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5986..6330
DNA (345bp) protein (115aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_215_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6439..9348)
DNA (2910bp) protein (970aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHS8_GALCS
ribonucleoside-diphosphate reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_215_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9452..9790)
DNA (339bp) protein (113aa)
PemK-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MazF family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_215_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9775..10017)
DNA (243bp) protein (81aa)
Helix-turn-helix protein, CopG family Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UB4_NITEU
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_215_12
Vibrio anguillarum, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10197..10574)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Halomonas stevensii RepID=UPI00037A38F8
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35238.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum).;"
PLM3_127_b2_sep16_scaffold_215_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11058..16901)
DNA (5844bp) protein (1948aa)
excinuclease ABC subunit A Tax=Caldimonas manganoxidans RepID=UPI00036E1B81
uvrA1; UvrABC system protein A
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM3_127_b2_sep16_scaffold_215_14
unknown

Not on your lists

comp(17345..19000)
DNA (1656bp) protein (552aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(19129..19473)
DNA (345bp) protein (115aa)
cytochrome c, class I; K00406 cytochrome c oxidase cbb3-type subunit III bin=bin7_NC10_sister species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_215_16
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19633..20655)
DNA (1023bp) protein (341aa)
ABC transporter substrate-binding protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F9F9AC
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJF01079.2}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
PLM3_127_b2_sep16_scaffold_215_17
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20854..21471
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TQP5_9PROT
glutathione S-transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_215_18
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21672..22115)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YK06_METFJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ03249.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
PLM3_127_b2_sep16_scaffold_215_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22225..22671)
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Methylophaga thiooxydans DMS010 RepID=C0N1W6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM31742.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
PLM3_127_b2_sep16_scaffold_215_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23022..23864)
DNA (843bp) protein (281aa)
hypothetical protein Tax=Methylococcus capsulatus RepID=UPI0003110BF2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24026..24409
DNA (384bp) protein (128aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI000380F650
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_22
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24538..25542)
DNA (1005bp) protein (335aa)
cytB; transmembrane cytochrome bd-II oxidase (Subunit II) oxidoreductase protein (EC:1.10.3.-)
Cytochrome bd-I oxidase subunit II Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ43_9BURK
Tax=GWA2_Rhodocyclales_65_20_curated
PLM3_127_b2_sep16_scaffold_215_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25539..26900)
DNA (1362bp) protein (454aa)
cytochrome D ubiquinol oxidase subunit I Tax=Caldimonas manganoxidans RepID=UPI00035FF40B
quinol oxidase subunit I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_215_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27213..28457
DNA (1245bp) protein (415aa)
Diguanylate cyclase bin=GWC2_Syntrophus__56_31 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_215_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28566..29714
DNA (1149bp) protein (383aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0003829888
glucose sorbosone dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_215_26
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29884..30732)
DNA (849bp) protein (283aa)
Phytanoyl-CoA dioxygenase Tax=alpha proteobacterium BAL199 RepID=A8U0P4_9PROT
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EDP62060.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
phytanoyl-CoA dioxygenase
PLM3_127_b2_sep16_scaffold_215_27
unknown

Not on your lists

comp(30769..30906)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_215_28
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(31013..31999)
DNA (987bp) protein (329aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5V5_9BACT
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_215_29
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32248..32787
DNA (540bp) protein (180aa)
Bet v I allergen Tax=Methylovorus RepID=C6X789_METSD
bet v i allergen
Bet v I allergen {ECO:0000313|EMBL:ACT51232.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
PLM3_127_b2_sep16_scaffold_215_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32993..33757
DNA (765bp) protein (255aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00035CC395
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 1-30 of 62 in total

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