name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_327_1
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..716)
|
TolC family type I secretion outer membrane protein Tax=Sulfuricella denitrificans skB26 RepID=S6B8S1_9PROT
TolC family type I secretion outer membrane protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
|
|
PLM3_127_b2_sep16_scaffold_327_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(937..1590)
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6ADT8_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
PLM3_127_b2_sep16_scaffold_327_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1843..3714
|
Phosphomethylpyrimidine synthase Tax=Nitrosospira sp. APG3 RepID=M5DNV3_9PROT
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
PLM3_127_b2_sep16_scaffold_327_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3740..4567
|
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BQ28_9GAMM
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
|
|
PLM3_127_b2_sep16_scaffold_327_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4604..5428
|
undecaprenol kinase (EC:3.6.1.27)
Undecaprenyl-diphosphatase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQC4_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
PLM3_127_b2_sep16_scaffold_327_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5615..6067)
|
Rhodanese-related sulfurtransferase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJM4_AZOSU
Rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:AEV25449.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
|
|
PLM3_127_b2_sep16_scaffold_327_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6373..7782
|
Glutamine synthetase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6P1_NITMU
glutamine synthetase, type I
Tax=RBG_16_Betaproteobacteria_64_18_curated
|
|
PLM3_127_b2_sep16_scaffold_327_8
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7959..8432
|
Conserved hypothetical secreted protein Tax=Azoarcus sp. (strain BH72) RepID=A1K3E9_AZOSB
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
|
|
PLM3_127_b2_sep16_scaffold_327_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8563..9606
|
ntrB; nitrogen regulation protein NR(II) (EC:2.7.13.1)
Nitrogen regulation protein NR(II) Tax=Azoarcus sp. (strain BH72) RepID=A1K3E8_AZOSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_327_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9635..11119
|
Nitrogen metabolism transcriptional regulator NtrC Tax=Sulfuricella denitrificans skB26 RepID=S6AE79_9PROT
nitrogen metabolism transcriptional regulator NtrC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
PLM3_127_b2_sep16_scaffold_327_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11379..12143)
|
Exodeoxyribonuclease III Xth Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQD2_SIDLE
exodeoxyribonuclease III Xth
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
|
|
PLM3_127_b2_sep16_scaffold_327_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12150..12740)
|
Glutaredoxin-like protein Tax=Sulfuricella denitrificans skB26 RepID=S6AE82_9PROT
glutaredoxin-like protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
PLM3_127_b2_sep16_scaffold_327_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12769..14799)
|
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A Tax=Thiobacillus thioparus RepID=UPI00037060C3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
PLM3_127_b2_sep16_scaffold_327_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14890..16164)
|
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase Tax=Sulfuricella denitrificans skB26 RepID=S6AAT7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_327_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16178..17131)
|
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DX13_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_327_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17131..17643)
|
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR Tax=Nitrosospira sp. APG3 RepID=M5DLA2_9PROT
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
PLM3_127_b2_sep16_scaffold_327_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17630..18100)
|
Putative Holliday junction resolvase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=RUVX_METFK
Holliday junction resolvase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
PLM3_127_b2_sep16_scaffold_327_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18134..18700)
|
UPF0301 protein Dsui_0593 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFY2_AZOSU
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
PLM3_127_b2_sep16_scaffold_327_19
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18951..19451
|
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Sulfuricella denitrificans skB26 RepID=S6ABF5_9PROT
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:BAN34658.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
PLM3_127_b2_sep16_scaffold_327_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19448..19837
|
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
PLM3_127_b2_sep16_scaffold_327_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19867..20286
|
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM13_AZOSU
hypothetical protein
Tax=CG_Rhodocyc_01
|
|
PLM3_127_b2_sep16_scaffold_327_22
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20349..20750
|
RDD protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA64_NITMU
RDD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
PLM3_127_b2_sep16_scaffold_327_23
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20874..21950)
|
Permease YjgP/YjgQ Tax=Sulfuricella denitrificans skB26 RepID=S6AJE8_9PROT
permease YjgP/YjgQ
Tax=CG_Beta_01
|
|
PLM3_127_b2_sep16_scaffold_327_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21947..23035)
|
Permease YjgP/YjgQ family protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMG3_SIDLE
permease YjgP/YjgQ family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
PLM3_127_b2_sep16_scaffold_327_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23115..24605
|
leucyl aminopeptidase (EC:3.4.11.1)
multifunctional aminopeptidase A Tax=Methyloversatilis universalis RepID=UPI000362F07E
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
PLM3_127_b2_sep16_scaffold_327_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24890..25318
|
DNA polymerase III chi subunit, HolC Tax=Sulfuricella denitrificans skB26 RepID=S6AFI5_9PROT
DNA polymerase III subunit chi {ECO:0000313|EMBL:GAO35062.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
DNA polymerase III chi subunit, HolC
|
|
PLM3_127_b2_sep16_scaffold_327_27
unknown
|
Not on your lists |
25318..25773
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_327_28
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25873..27585
|
valyl-tRNA synthase Tax=Pandoraea sp. B-6 RepID=UPI000345BD29
valine--tRNA ligase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
PLM3_127_b2_sep16_scaffold_327_29
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27593..28678
|
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
Valine--tRNA ligase Tax=Burkholderia multivorans CF2 RepID=J5C431_9BURK
Suspect SCG annotation. See neighboring gene [PLM3_127_b2_sep16_scaffold_327_28].
valS; valyl-tRNA synthetase
|
|
PLM3_127_b2_sep16_scaffold_327_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28957..30201
|
Membrane protein, major facilitator superfamily Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHN3_GEOBB
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|