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PLM3_127_b2_sep16_scaffold_355

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_355_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..825)
DNA (825bp) protein (275aa)
hypothetical protein bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_355_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

987..2453
DNA (1467bp) protein (489aa)
Uncharacterized protein Tax=Rhizobium sp. CF080 RepID=J2SSC3_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_355_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2804..3409)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FF2CB
mobile mystery protein B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_355_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3400..3735)
DNA (336bp) protein (112aa)
Transcriptional regulator, XRE family bin=GWC2_Alphaproteobacteria_42_16 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
mobile mystery protein A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_355_5
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4450..4686
DNA (237bp) protein (79aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3_127_b2_sep16_scaffold_355_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4683..5081
DNA (399bp) protein (133aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_355_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5291..5527
DNA (237bp) protein (79aa)
hypothetical protein bin=THIO_HI species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria
AbrB family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_355_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5524..5952
DNA (429bp) protein (143aa)
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:AJP49439.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein bin=THIO_MID species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PLM3_127_b2_sep16_scaffold_355_9
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6173..6412
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQR0_PHAMO
Prevent-host-death family protein {ECO:0000313|EMBL:EXI73653.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_355_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6413..6838
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AA99_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_355_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7266..7466
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G3A8_9DELT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_355_12
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7580..7876
DNA (297bp) protein (99aa)
PilT protein domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB96_GEOUR
PilT domain-containing protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_355_13
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8040..9059)
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH88_ACIET
Uncharacterized protein {ECO:0000313|EMBL:KGE06232.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_355_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9052..9648)
DNA (597bp) protein (199aa)
Putative uncharacterized protein Tax=Variovorax paradoxus (strain S110) RepID=C5CVB6_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18565.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3_127_b2_sep16_scaffold_355_15
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9886..10371
DNA (486bp) protein (162aa)
Putative negative regulator of replication initiation seq A Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8W9D7_MARHY
negative regulator of replication initiation seq A
Putative negative regulator of replication initiation seq A {ECO:0000313|EMBL:CCG97165.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus ATCC 49840.;"
PLM3_127_b2_sep16_scaffold_355_16

Not on your lists

10872..11768
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU42_PSEUU
Marine sediment metagenome DNA, contig: S01H1_S25503 {ECO:0000313|EMBL:GAG33997.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_355_17
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

11804..14203
DNA (2400bp) protein (800aa)
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
type I restriction-modification protein subunit M Tax=Lamprocystis purpurea RepID=UPI000372FD11
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3_127_b2_sep16_scaffold_355_18
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

14194..15492
DNA (1299bp) protein (433aa)
Type I restriction-modification system specificity subunit Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSF6_THISH
type I restriction-modification system specificity subunit
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_127_b2_sep16_scaffold_355_19
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15489..16067
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SN04_9DELT
Tax=CG_Mariprof_05
PLM3_127_b2_sep16_scaffold_355_20
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

16064..19177
DNA (3114bp) protein (1038aa)
restriction endonuclease Tax=Lamprocystis purpurea RepID=UPI000368401F
type I restriction-modification system restriction subunit
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3_127_b2_sep16_scaffold_355_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19177..19893
DNA (717bp) protein (239aa)
Putative uncharacterized protein Tax=Methylobacter tundripaludum SV96 RepID=G3ITG1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW21371.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
putative metal-dependent hydrolase
PLM3_127_b2_sep16_scaffold_355_22
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

20021..20830
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Citreicella sp. 357 RepID=I1B2L0_9RHOB
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM3_127_b2_sep16_scaffold_355_23
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20922..21659
DNA (738bp) protein (246aa)
CBS domain containing protein Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TQZ8_BACCJ
CBS domain containing protein
CBS domain containing protein {ECO:0000313|EMBL:ADU29374.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
PLM3_127_b2_sep16_scaffold_355_24
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22099..22632
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EE92_CHLL2
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
PLM3_127_b2_sep16_scaffold_355_25
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22700..23797
DNA (1098bp) protein (366aa)
Putative uncharacterized protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLX7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ44208.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
PLM3_127_b2_sep16_scaffold_355_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23820..25163
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Pseudomonas fluorescens A506 RepID=I2BZ83_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59566.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
PLM3_127_b2_sep16_scaffold_355_27

Not on your lists

25185..26063
DNA (879bp) protein (293aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JE63_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36821.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SIR2-like domain protein
PLM3_127_b2_sep16_scaffold_355_28

Not on your lists

26679..28526
DNA (1848bp) protein (616aa)
Uncharacterized protein Tax=Treponema denticola AL-2 RepID=M2CAD0_TREDN
Uncharacterized protein {ECO:0000313|EMBL:KKL47425.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA binding S1 domain-containing protein
PLM3_127_b2_sep16_scaffold_355_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29310..30020)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036E4AAD
NADP oxidoreductase, coenzyme f420-dependent
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_355_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30138..31388)
DNA (1251bp) protein (417aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000374BE8F
inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 71 in total

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