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PLM3_127_b2_sep16_scaffold_453

Search features with annotation key words

Displaying items 31-60 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_453_31
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35054..35443)
DNA (390bp) protein (130aa)
Adenylyl cyclase class-3/4/guanylyl cyclase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHH5_SYNFM
adenylyl cyclase class-3/4/guanylyl cyclase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_453_32
Gemmata sp. Wa1-1, Gemmata, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(35791..36573)
DNA (783bp) protein (261aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
Tryptophan 2,3-dioxygenase Tax=Gemmata sp. Wa1-1 RepID=Q6W756_9PLAN
tryptophan 23-dioxygenase
PLM3_127_b2_sep16_scaffold_453_33
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36564..37895)
DNA (1332bp) protein (444aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like FAD-dependent oxidoreductase (EC:1.14.13.9)
kynurenine 3-monooxygenase Tax=Pontibacter roseus RepID=UPI00036D42F1
PLM3_127_b2_sep16_scaffold_453_34
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37923..39224)
DNA (1302bp) protein (434aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Kynureninase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U719_MYXSD
kynureninase
PLM3_127_b2_sep16_scaffold_453_35
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39221..40174)
DNA (954bp) protein (318aa)
2-amino-3-carboxymuconate 6-semialdehyde decarboxylase Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJY1_9BACT
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:AKD05573.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3_127_b2_sep16_scaffold_453_36
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40262..40783)
DNA (522bp) protein (174aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
3-hydroxyanthranilate 3,4-dioxygenase Tax=Pontibacter roseus RepID=UPI00035D0689
PLM3_127_b2_sep16_scaffold_453_37
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

41240..41887
DNA (648bp) protein (216aa)
Tetratricopeptide TPR_2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_453_38
unknown

Not on your lists

41893..42000
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_39
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42177..42821)
DNA (645bp) protein (215aa)
3-hydroxyisobutyrate dehydrogenase Tax=Azoarcus sp. KH32C RepID=H0Q4P6_9RHOO
3-hydroxyisobutyrate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_453_40
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42769..43047)
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=Burkholderia dolosa AUO158 RepID=A2WGD3_9BURK
3-hydroxyisobutyrate dehydrogenase family protein
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase family protein {ECO:0000313|EMBL:AJY09234.1}; Uncharacterized protein {ECO:0000313|EMBL:EAY71029.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
PLM3_127_b2_sep16_scaffold_453_41
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43122..44219
DNA (1098bp) protein (366aa)
Zn-dependent hydrolase Tax=Herbaspirillum sp. GW103 RepID=I3CTR7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KIG08848.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_453_42
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44182..45348
DNA (1167bp) protein (389aa)
Epoxyqueuosine reductase Tax=Nitrosospira sp. APG3 RepID=M5DK55_9PROT
4Fe-4S cluster binding
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_453_43
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45569..46987
DNA (1419bp) protein (473aa)
hss; homospermidine synthase (EC:2.5.1.44)
Homospermidine synthase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INL9_RHOCS
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_453_44
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47178..47687)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJ53_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM3_127_b2_sep16_scaffold_453_45
unknown

Not on your lists

comp(47835..48428)
DNA (594bp) protein (198aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_46
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48487..48900)
DNA (414bp) protein (138aa)
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_127_b2_sep16_scaffold_453_47
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48978..49703)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI000378656D
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
PLM3_127_b2_sep16_scaffold_453_48
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50124..50573
DNA (450bp) protein (150aa)
Cytochrome c class II Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCP3_GALCS
cytochrome c class II
Cytochrome c class II {ECO:0000313|EMBL:ADL56624.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
PLM3_127_b2_sep16_scaffold_453_49
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

50666..51319
DNA (654bp) protein (218aa)
All4737 protein bin=GWC2_Methylomirabilis_70_16 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_453_50
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51309..52001)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Methylotenera RepID=UPI0003608A81
Uncharacterized protein {ECO:0000313|EMBL:KJS28742.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
hydrogenase
PLM3_127_b2_sep16_scaffold_453_51
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52011..52724)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Halomonas stevensii RepID=UPI0002F1F2B4
2-haloalkanoic acid dehalogenase, type II
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_453_52
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53123..54523
DNA (1401bp) protein (467aa)
Putative AP superfamily protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHS1_9BURK
Putative AP superfamily protein {ECO:0000313|EMBL:EHR70333.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phosphodiesterase
PLM3_127_b2_sep16_scaffold_453_53
unknown

Not on your lists

54520..54636
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_54
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54633..56237
DNA (1605bp) protein (535aa)
Putative metal-dependent hydrolase with TIM-barrel fold Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR9_9BURK
Putative metal-dependent hydrolase with TIM-barrel fold {ECO:0000313|EMBL:EHR70331.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative metal-dependent hydrolase with TIM-barrel fold
PLM3_127_b2_sep16_scaffold_453_55
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56270..57472
DNA (1203bp) protein (401aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthetase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR8_9BURK
3-dehydroquinate synthetase {ECO:0000313|EMBL:EHR70330.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PLM3_127_b2_sep16_scaffold_453_56
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57469..58671
DNA (1203bp) protein (401aa)
Xylose isomerase-like enzyme Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR7_9BURK
Xylose isomerase-like enzyme {ECO:0000313|EMBL:EHR70329.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Sugar phosphate isomerase family enzyme
PLM3_127_b2_sep16_scaffold_453_57
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58779..59651
DNA (873bp) protein (291aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHR6_9BURK
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:EHR70328.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_453_58
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59927..60130
DNA (204bp) protein (68aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM3_127_b2_sep16_scaffold_453_59
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60653..60913
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PVS5_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_453_60
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61333..62076)
DNA (744bp) protein (248aa)
Diguanylate phosphodiesterase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF55_GALCS
diguanylate phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying items 31-60 of 103 in total

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