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PLM3_127_b2_sep16_scaffold_453

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Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_453_1
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83..1477)
DNA (1395bp) protein (465aa)
manganese transporter NRAMP bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative uncharacterized protein {ECO:0000313|EMBL:EFL38494.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
Mn2+/Fe2_ transporter, NRAMP family
PLM3_127_b2_sep16_scaffold_453_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1779..3149)
DNA (1371bp) protein (457aa)
Glutathione-disulfide reductase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTH0_THISH
glutathione-disulfide reductase
Glutathione-disulfide reductase {ECO:0000313|EMBL:ACL71230.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_453_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3217..4269
DNA (1053bp) protein (351aa)
NAD-dependent dehydratase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626E21
NAD-dependent dehydratase {ECO:0000313|EMBL:KJC56770.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
NAD-dependent epimerase/dehydratase
PLM3_127_b2_sep16_scaffold_453_4
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4349..5074
DNA (726bp) protein (242aa)
Glutathione S-transferase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QU12_NOSS7
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AFY48873.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
PLM3_127_b2_sep16_scaffold_453_5
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5233..5808)
DNA (576bp) protein (192aa)
Transcription elongation factor GreB Tax=Burkholderia dolosa AUO158 RepID=A2WBW3_9BURK
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
PLM3_127_b2_sep16_scaffold_453_6
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5844..6200)
DNA (357bp) protein (119aa)
Regulator of competence-specific gene Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W7N9_MAGSA
regulator of competence-specific gene
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
PLM3_127_b2_sep16_scaffold_453_7
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6289..6801
DNA (513bp) protein (171aa)
AhpC/TSA family protein 8 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SW13_ALCXX
AhpC/TSA family protein 8 {ECO:0000313|EMBL:EGP47784.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
Peroxiredoxin
PLM3_127_b2_sep16_scaffold_453_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6926..7765)
DNA (840bp) protein (280aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHG1_AZOSU
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:BAO29799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PLM3_127_b2_sep16_scaffold_453_9
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7955..8332)
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IGF9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79725.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_453_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..9050)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Hoeflea sp. 108 RepID=UPI00035C0A50
Methyltransferase type 11 {ECO:0000313|EMBL:EHS49986.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_453_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9118..9300)
DNA (183bp) protein (61aa)
thiamine ABC transporter ATP-binding protein Tax=Kaistia granuli RepID=UPI00036F7E73
sugar ABC transporter permease exported protein
Tax=GWE1_Burkholderiales_65_30_curated
PLM3_127_b2_sep16_scaffold_453_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9496..11046
DNA (1551bp) protein (517aa)
Amidohydrolase 2 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS74_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ETX06850.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amidohydrolase 2
PLM3_127_b2_sep16_scaffold_453_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11100..12173
DNA (1074bp) protein (358aa)
Putative mandelate racemase/muconate lactonizing enzyme Tax=Pelagibacter sp. (strain IMCC9063) RepID=F2I1R1_PELSM
mandelate racemase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_453_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12532..14022
DNA (1491bp) protein (497aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=Burkholderia terrae BS001 RepID=I5D0D1_9BURK
aldehyde dehydrogenase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_453_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14101..15153
DNA (1053bp) protein (351aa)
Alcohol dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2J8N1_9PROT
Alcohol dehydrogenase {ECO:0000313|EMBL:EKE71583.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
iditol 2-dehydrogenase
PLM3_127_b2_sep16_scaffold_453_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15240..16343
DNA (1104bp) protein (368aa)
Putative exported solute binding protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MI79_RHISN
exported solute binding protein
Putative exported solute binding protein {ECO:0000313|EMBL:ACP24427.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
PLM3_127_b2_sep16_scaffold_453_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16420..16971
DNA (552bp) protein (184aa)
Putative transporter DctQ-related transmembrane protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MI80_RHISN
transporter DctQ-related transmembrane protein
Putative transporter DctQ-related transmembrane protein {ECO:0000313|EMBL:ACP24428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
PLM3_127_b2_sep16_scaffold_453_18
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16988..18325
DNA (1338bp) protein (446aa)
Putative TRAP family transmembrane transporter protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MI81_RHISN
TRAP family transmembrane transporter protein
Putative TRAP family transmembrane transporter protein {ECO:0000313|EMBL:ACP24429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
PLM3_127_b2_sep16_scaffold_453_19
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18400..19695)
DNA (1296bp) protein (432aa)
OAH/OAS sulfhydrylase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHG0_AZOSU
OAH/OAS sulfhydrylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_453_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19952..21043)
DNA (1092bp) protein (364aa)
D-3-hydroxyaspartate aldolase (EC:4.1.3.-)
Alanine racemase domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2IZ60_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_453_21
unknown

Not on your lists

comp(21077..21379)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21535..22167
DNA (633bp) protein (211aa)
Tetratricopeptide TPR_2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_453_23
unknown

Not on your lists

22789..23340
DNA (552bp) protein (184aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_24
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

23283..25124
DNA (1842bp) protein (614aa)
putative hybrid histidine kinase (EC:2.7.13.3)
Putative Hybrid histidine kinase {ECO:0000313|EMBL:CBK40807.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBK40807.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Hybrid histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PC48_9BACT
PLM3_127_b2_sep16_scaffold_453_25
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

25117..26493
DNA (1377bp) protein (459aa)
Putative phytochrome sensor protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM22_METNO
putative phytochrome sensor protein
Tax=CG_Arma_02
PLM3_127_b2_sep16_scaffold_453_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

26643..27791
DNA (1149bp) protein (383aa)
ATPase (AAA+ superfamily)-like protein bin=GWA2_Deltaproteo_65_63 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
putative uncharacterized protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM3_127_b2_sep16_scaffold_453_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27910..33099
DNA (5190bp) protein (1730aa)
multi-sensor hybrid histidine kinase Tax=Ruegeria conchae RepID=UPI000237963F
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_453_28
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33096..33473
DNA (378bp) protein (126aa)
chemotaxis protein CheY Tax=Xanthobacteraceae RepID=UPI000370BC97
response regulator receiver protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_453_29
unknown

Not on your lists

comp(33308..33676)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_453_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

34060..34842
DNA (783bp) protein (261aa)
adenylate/guanylate cyclase bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 103 in total

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