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PLM3_127_b2_sep16_scaffold_911

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_911_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..2638
DNA (2637bp) protein (879aa)
leucyl-tRNA synthetase Tax=Uliginosibacterium gangwonense RepID=UPI00037DC934
leucyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_911_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2821..3291
DNA (471bp) protein (157aa)
Lipoprotein B transmembrane Tax=Sulfuricella denitrificans skB26 RepID=S6AAN4_9PROT
lipoprotein B transmembrane
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_911_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3336..4478
DNA (1143bp) protein (381aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase Tax=Azoarcus sp. (strain BH72) RepID=METX_AZOSB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_911_4
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4475..5095
DNA (621bp) protein (207aa)
Methionine biosynthesis protein MetW Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIZ3_NITSI
methionine biosynthesis protein MetW
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_911_5
unknown

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comp(5103..5222)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_911_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5251..6609)
DNA (1359bp) protein (453aa)
MFS transporter Tax=Sphingopyxis baekryungensis RepID=UPI0003B45387
major facilitator transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_911_7
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6739..7515)
DNA (777bp) protein (259aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ADZ26161.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ADZ26161.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
Exodeoxyribonuclease III Xth Tax=Nitrosomonas sp. AL212 RepID=F9ZHD6_9PROT
PLM3_127_b2_sep16_scaffold_911_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7524..8168
DNA (645bp) protein (215aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTG6_SIDLE
Tax=RBG_16_Gallionellales_56_9_curated
PLM3_127_b2_sep16_scaffold_911_9
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8165..8797
DNA (633bp) protein (211aa)
hypothetical protein bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
PLM3_127_b2_sep16_scaffold_911_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8799..10295)
DNA (1497bp) protein (499aa)
glutamyl-tRNA amidotransferase subunit B Tax=Methyloversatilis universalis RepID=UPI00038188F5
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_911_11
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10469..11923)
DNA (1455bp) protein (485aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5E7_RAMTT
aspartyl/glutamyl-tRNA amidotransferase subunit A
PLM3_127_b2_sep16_scaffold_911_12
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11934..12350)
DNA (417bp) protein (139aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Burkholderia glumae RepID=C5AF20_BURGB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
PLM3_127_b2_sep16_scaffold_911_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12395..13438
DNA (1044bp) protein (348aa)
Cell shape determining protein, MreB/Mrl family bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Rod shape-determining protein MreB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_911_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13572..14474
DNA (903bp) protein (301aa)
Cell shape-determining protein MreC Tax=Nitrosospira sp. APG3 RepID=M5DHZ4_9PROT
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_911_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14471..15004
DNA (534bp) protein (178aa)
rod shape-determining protein MreD Tax=Herbaspirillum sp. JC206 RepID=UPI0002EAC79B
mreD; rod shape-determining MreD transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_911_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15019..17025
DNA (2007bp) protein (669aa)
Penicillin-binding protein 2 Tax=Sulfuricella denitrificans skB26 RepID=S6AHH2_9PROT
penicillin-binding protein 2
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_911_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17018..18112
DNA (1095bp) protein (365aa)
Rod shape-determining protein RodA Tax=Sulfuricella denitrificans skB26 RepID=S6A9E1_9PROT
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_911_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18143..19078
DNA (936bp) protein (312aa)
Rare lipoprotein A Tax=Sulfuricella denitrificans skB26 RepID=S6AE18_9PROT
rare lipoprotein A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_911_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19100..20035
DNA (936bp) protein (312aa)
PfkB Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCK4_NITMU
PfkB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_911_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20074..20856
DNA (783bp) protein (261aa)
Phospholipid/glycerol acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6B823_9PROT
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:BAN36572.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_911_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20828..21643)
DNA (816bp) protein (272aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=APAH_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_911_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21815..22375)
DNA (561bp) protein (187aa)
Cytochrome c, class I Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCK8_NITMU
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_911_23
unknown

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comp(22485..23618)
DNA (1134bp) protein (378aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_911_trna_1
unknown

Not on your lists

22490..22563
DNA (74bp)
transferRNA Arg
Displaying 24 items

View Taxonomy