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PLM3_127_b2_sep16_scaffold_917

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_917_1
unknown

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3..92
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_917_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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89..598
DNA (510bp) protein (170aa)
Secretion protein HlyD family protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVW6_PARL1
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABS64049.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_127_b2_sep16_scaffold_917_3
unknown

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595..780
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_917_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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844..1983
DNA (1140bp) protein (380aa)
RND family efflux transporter, MFP subunit Tax=Sulfuricella denitrificans skB26 RepID=S6B088_9PROT
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:BAN34147.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_917_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1980..5117
DNA (3138bp) protein (1046aa)
Cation/multidrug efflux pump Tax=Beggiatoa alba B18LD RepID=I3CKZ5_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIJ44288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
cation/multidrug efflux pump
PLM3_127_b2_sep16_scaffold_917_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5288..5749
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6C3_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34759.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
PLM3_127_b2_sep16_scaffold_917_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5895..7583
DNA (1689bp) protein (563aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase Tax=Alcanivorax sp. PN-3 RepID=U7HHD4_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_917_8
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7615..8844
DNA (1230bp) protein (410aa)
Oxidoreductase molybdopterin binding protein SorA Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN55_CUPNN
sorA; oxidoreductase molybdopterin binding protein SorA
Oxidoreductase molybdopterin binding protein SorA {ECO:0000313|EMBL:AEI80243.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
PLM3_127_b2_sep16_scaffold_917_9
uncultured Aquificae bacterium, Aquificae, Aquificae, Bacteria

Not on your lists

8854..9129
DNA (276bp) protein (92aa)
Sulfite:cytochrome c oxidoreductase subunit B Tax=uncultured Aquificae bacterium RepID=H5SDU0_9BACT
Sulfite:cytochrome c oxidoreductase subunit B {ECO:0000313|EMBL:BAL54326.1}; species="Bacteria; Aquificae; environmental samples.;" source="uncultured Aquificae bacterium.;"
sorB; sulfite:cytochrome c oxidoreductase subunit B
PLM3_127_b2_sep16_scaffold_917_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9208..10185
DNA (978bp) protein (326aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
accA; acetyl-CoA carboxylase, carboxyl transferase, subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Sulfuricella denitrificans skB26 RepID=S6B4Y6_9PROT
PLM3_127_b2_sep16_scaffold_917_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10274..11701
DNA (1428bp) protein (476aa)
tRNA(Ile)-lysidine synthase Tax=Nitrosospira sp. APG3 RepID=M5DJB6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_917_12

Not on your lists

11746..12756
DNA (1011bp) protein (337aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CUS1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96810.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TRAP dicarboxylate transporter, DctP subunit
PLM3_127_b2_sep16_scaffold_917_13

Not on your lists

12762..13310
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EE59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96809.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tripartite ATP-independent periplasmic transporter, DctQ component family protein
PLM3_127_b2_sep16_scaffold_917_14
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13307..14596
DNA (1290bp) protein (430aa)
TRAP dicarboxylate transporter, DctM subunit Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRR0_SIDLE
TRAP dicarboxylate transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADE11646.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM3_127_b2_sep16_scaffold_917_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14602..15177)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AAC6_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_917_16
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15360..15785
DNA (426bp) protein (142aa)
ndk; nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase Tax=Nitrosospira sp. APG3 RepID=M5DW99_9PROT
Tax=RBG_16_Gallionellales_57_15_curated
PLM3_127_b2_sep16_scaffold_917_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15785..16870
DNA (1086bp) protein (362aa)
Dual-specificity RNA methyltransferase RlmN Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=RLMN_METFK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_917_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16867..17631
DNA (765bp) protein (255aa)
Type IV pilus biogenesis/stability protein PilW Tax=Sulfuricella denitrificans skB26 RepID=S6B4X4_9PROT
type IV pilus biogenesis/stability protein PilW
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_917_19
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17631..18392
DNA (762bp) protein (254aa)
XRE family transcriptional regulator Tax=Sulfuricella denitrificans skB26 RepID=S6AHJ5_9PROT
XRE family transcriptional regulator
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_917_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18443..19687
DNA (1245bp) protein (415aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GCP8_NITSI
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_917_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19725..21002
DNA (1278bp) protein (426aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Sulfuricella denitrificans skB26 RepID=S6ALP8_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_917_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21018..21653
DNA (636bp) protein (212aa)
membrane protein Tax=Cupriavidus sp. WS RepID=UPI00037361AD
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_917_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21650..22786
DNA (1137bp) protein (379aa)
Outer membrane protein assembly factor BamB Tax=Sulfuricella denitrificans skB26 RepID=S6B4W8_9PROT
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
outer membrane assembly lipoprotein YfgL
PLM3_127_b2_sep16_scaffold_917_24
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22981..23148)
DNA (168bp) protein (56aa)
Outer membrane protein assembly factor BamB Tax=Ralstonia solanacearum K60-1 RepID=H5W996_RALSL
quinonprotein alcohol dehydrogenase-like protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Displaying 24 items

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