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PLM3_127_b2_sep16_scaffold_981

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_981_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)
ABC transporter Tax=Sulfuricella denitrificans skB26 RepID=S6AE52_9PROT
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAN34006.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_981_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..834)
DNA (531bp) protein (177aa)
Alpha/beta hydrolase Tax=Sulfuricella denitrificans skB26 RepID=S6AZS1_9PROT
alpha/beta hydrolase
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_981_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(888..1223)
DNA (336bp) protein (112aa)
Putative ferredoxin 2fe-2s protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TL2_NITEU
ferredoxin 2fe-2s protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_981_4
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1225..1557)
DNA (333bp) protein (111aa)
MazG nucleotide pyrophosphohydrolase Tax=Thauera sp. 27 RepID=N6XLE7_9RHOO
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:ENO82471.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_981_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1569..2729)
DNA (1161bp) protein (387aa)
VanZ family protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJY8_ACCPU
VanZ family protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_981_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2742..3698
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AHL8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_981_7
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4786)
DNA (1056bp) protein (352aa)
Putrescine-binding periplasmic protein Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8H3_COLFT
potD; ABC transporter periplasmic spermidine putrescine-binding protein potD
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
PLM3_127_b2_sep16_scaffold_981_8
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4907..5680)
DNA (774bp) protein (258aa)
Spermidine Putrescine ABC transporter permease component potC Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8H2_COLFT
potC; Spermidine Putrescine ABC transporter permease component potC
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:AIY39866.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
PLM3_127_b2_sep16_scaffold_981_9
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5677..6573)
DNA (897bp) protein (299aa)
Spermidine/putrescine transport system permease protein PotB Tax=Herminiimonas arsenicoxydans RepID=A4G8X7_HERAR
potB; spermidine/putrescine ABC transporter inner membrane protein
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:CAL62964.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
PLM3_127_b2_sep16_scaffold_981_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6832..7917)
DNA (1086bp) protein (362aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
Putrescine/spermidine ABC transporter ATP-binding protein Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZNC5_9NEIS
potA; polyamine transport protein PotA
PLM3_127_b2_sep16_scaffold_981_11
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8110..9564)
DNA (1455bp) protein (485aa)
Phosphate-selective porin O and P Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XA28_METSD
phosphate-selective porin O and P
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
PLM3_127_b2_sep16_scaffold_981_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..11272)
DNA (1524bp) protein (508aa)
ubiB; ubiquinone biosynthesis protein UbiB (EC:1.14.13.-)
Probable protein kinase UbiB Tax=Sulfuricella denitrificans skB26 RepID=S6AEE5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_981_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11312..11896)
DNA (585bp) protein (195aa)
sterol-binding protein Tax=Herbaspirillum lusitanum RepID=UPI000365A1F0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_981_14
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11902..12639)
DNA (738bp) protein (246aa)
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Tax=Dechloromonas aromatica (strain RCB) RepID=Q477Y8_DECAR
Tax=BJP_08E140C01_Dechloromonas_61_78
PLM3_127_b2_sep16_scaffold_981_15
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12683..13162)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Azoarcus sp. (strain BH72) RepID=A1K1S6_AZOSB
hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
PLM3_127_b2_sep16_scaffold_981_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13285..13971
DNA (687bp) protein (229aa)
PhoB Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DA48_LARHH
phoB; PhoB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_981_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..15393
DNA (1338bp) protein (446aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDD1_NITSI
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_981_18
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15390..15770)
DNA (381bp) protein (127aa)
Histidine triad (HIT) protein Tax=Methylotenera sp. (strain 301) RepID=D7DNI4_METS0
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADI30985.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
PLM3_127_b2_sep16_scaffold_981_19
unknown

Not on your lists

16307..16804
DNA (498bp) protein (166aa)
Transposase, IS4 Tax=uncultured bacterium RepID=C5JAJ7_9BACT
PLM3_127_b2_sep16_scaffold_981_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

16939..17310
DNA (372bp) protein (124aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_127_b2_sep16_scaffold_981_21
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17466..18251
DNA (786bp) protein (262aa)
Glutathione S-transferase, N-terminal domain Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUQ0_PARL1
glutathione S-transferase domain-containing protein
Glutathione S-transferase, N-terminal domain {ECO:0000313|EMBL:ABS63633.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_127_b2_sep16_scaffold_981_22
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18368..19402)
DNA (1035bp) protein (345aa)
Transcriptional regulator, AraC family Tax=Burkholderia sp. YI23 RepID=G8MIG4_9BURK
araC; transcriptional regulator, AraC family
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_127_b2_sep16_scaffold_981_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19501..20310
DNA (810bp) protein (270aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI0003722047
fatty acid hydroxylase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM3_127_b2_sep16_scaffold_981_24
unknown

Not on your lists

20343..20483
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_981_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20803..21789
DNA (987bp) protein (329aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_981_26
unknown

Not on your lists

21975..22184
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 26 items

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