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PLM3_127_b2_sep16_scaffold_178_10

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(9609..10262)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family Tax=Variovorax paradoxus (strain EPS) RepID=E6V5X4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 201.0
  • Bit_score: 175
  • Evalue 3.70e-41
LysR family transcriptional regulator {ECO:0000313|EMBL:KIZ46045.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 200.0
  • Bit_score: 176
  • Evalue 3.90e-41
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 200.0
  • Bit_score: 175
  • Evalue 1.00e-41

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGGCCTTCGGCCAGCTCTACATGCTTCCCCTGGTATTCCGCTTCCGGCAAAAGTACCCGGGGCTGGCCGTAGACCTGACCCTGAACGACCGCTACGTGGACCTGGTGCAGGAAGGGGTGGACGTCGCCATCCGCTTCGGCGATCTCGCGGACTCGCAGGTCGTGGCCCGTGGCGTGGGCGGGGTCGCGCGGGTGTGTGTCGCCTCGCCGGACTACCTGCGCGCGCGCGGCACGCCGCACTCGCCGGCCGATCTGTCGGCGCACAACTGCATCACCTACAACTACCTGTTCAGCAACGAGTGGCAGTTCGAAGGGCCGCAGGGACCGCTGTCAGTGCGCGTCAAGGGAGACTTCCGCGCCAACAGCGCCATCACCATCCGCGCCGCCGCGCTCGAAGGCATCGGCATTGCCCACATGCCGGCCGTGTTCGTGCAGGAAGACATCGACAAGGGCAGACTTACGCAGGTGCTGGCCGATTACGGGCCGCCGCCGGTGGACATCCATACCGTGTATCCATCGGCGCGCTTCCTGTCGAGCAAGGTGCGCCTTTTCCTCGATTTCGTGCGCGACCAGTTCCTGGATATTCCCGCGTTGCAATTCAGGACCGAAAGGCCGAAGCGGGTGCCGCGCATCCGCGCCAAGGTTGCATCCTGA
PROTEIN sequence
Length: 218
VAFGQLYMLPLVFRFRQKYPGLAVDLTLNDRYVDLVQEGVDVAIRFGDLADSQVVARGVGGVARVCVASPDYLRARGTPHSPADLSAHNCITYNYLFSNEWQFEGPQGPLSVRVKGDFRANSAITIRAAALEGIGIAHMPAVFVQEDIDKGRLTQVLADYGPPPVDIHTVYPSARFLSSKVRLFLDFVRDQFLDIPALQFRTERPKRVPRIRAKVAS*