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PLM3_127_b2_sep16_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_178_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..499
DNA (498bp) protein (166aa)
hypothetical protein bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_178_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(811..1542)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR Tax=Delftia sp. (strain Cs1-4) RepID=F6AZ52_DELSC
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM3_127_b2_sep16_scaffold_178_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1773..2147)
DNA (375bp) protein (125aa)
transcriptional regulator Tax=Marinobacterium rhizophilum RepID=UPI00036D4574
XRE family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_178_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2229..2558)
DNA (330bp) protein (110aa)
Putative HTH-type transcriptional regulator bin=GWA2_Ignavibacteria_55_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_178_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3426..3896)
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=uncultured marine bacterium MedDCM-OCT-S04-C448 RepID=D6PD31_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM3_127_b2_sep16_scaffold_178_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3930..4133)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Thermoanaerobacteraceae RepID=D7ASV8_THEM3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_178_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4273..6693)
DNA (2421bp) protein (807aa)
DNA topoisomerase 4 subunit A Tax=Burkholderia sp. RPE64 RepID=R4WFU5_9BURK
parC; DNA topoisomerase IV A subunit
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_178_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6900..8888)
DNA (1989bp) protein (663aa)
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZ09_CHRVO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_178_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9084..9584)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI00036D8F4D
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_178_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9609..10262)
DNA (654bp) protein (218aa)
Transcriptional regulator, LysR family Tax=Variovorax paradoxus (strain EPS) RepID=E6V5X4_VARPE
LysR family transcriptional regulator {ECO:0000313|EMBL:KIZ46045.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
LysR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_178_11
unknown

Not on your lists

10644..10793
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_12
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10989..11870)
DNA (882bp) protein (294aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Hydroxypyruvate isomerase Tax=Bradyrhizobium sp. STM 3843 RepID=H0TWA7_9BRAD
hydroxypyruvate isomerase
PLM3_127_b2_sep16_scaffold_178_13
unknown

Not on your lists

12020..12424
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

12504..13820
DNA (1317bp) protein (439aa)
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFD1_9FIRM
mandelate racemase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_178_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14021..14809)
DNA (789bp) protein (263aa)
High-affinity nickel-transport family protein bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
high-affinity nickel-transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_178_16
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15014..16816
DNA (1803bp) protein (601aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI000363F263
Uncharacterized protein {ECO:0000313|EMBL:EGK70193.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_178_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16912..18144
DNA (1233bp) protein (411aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RGY8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ETX02434.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_178_18
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18350..18736
DNA (387bp) protein (129aa)
Anti-sigma factor antagonist Tax=Janthinobacterium sp. HH01 RepID=L9PAZ9_9BURK
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-anti-sigma regulatory factor, SpoIIAA
PLM3_127_b2_sep16_scaffold_178_19
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18739..19698
DNA (960bp) protein (320aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378C54F
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_178_20
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19779..21881
DNA (2103bp) protein (701aa)
Putative chase2 sensor protein Tax=Janthinobacterium sp. HH01 RepID=L9PD84_9BURK
stage II sporulation E family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3_127_b2_sep16_scaffold_178_21
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21924..22562)
DNA (639bp) protein (213aa)
OmpA/MotB domain protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIR6_ACCPU
OmpA/MotB domain-containing protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3_127_b2_sep16_scaffold_178_22
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22565..23041)
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ4_DECAR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_127_b2_sep16_scaffold_178_23
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23183..23605
DNA (423bp) protein (141aa)
serine/threonine protein kinase Tax=Desulfospira joergensenii RepID=UPI0003B34398
sensor histidine kinase
Tax=BJP_IG2103_Dechloromonas_60_92
PLM3_127_b2_sep16_scaffold_178_24
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23580..26213)
DNA (2634bp) protein (878aa)
von Willebrand factor type A Tax=Rhodopirellula baltica SH28 RepID=K5D8U3_RHOBT
von Willebrand factor type A {ECO:0000313|EMBL:EKK03172.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
chloride channel
PLM3_127_b2_sep16_scaffold_178_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26189..27979)
DNA (1791bp) protein (597aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y4V5_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_178_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27976..28863)
DNA (888bp) protein (296aa)
von Willebrand factor type A Tax=Sorangium cellulosum So0157-2 RepID=S4Y484_SORCE
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:AGP39271.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_127_b2_sep16_scaffold_178_27
unknown

Not on your lists

comp(28929..29030)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_178_28

Not on your lists

comp(29057..30052)
DNA (996bp) protein (332aa)
Methanol dehydrogenase regulatory protein Tax=uncultured bacterium 126 RepID=E3T707_9BACT
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:ADC36101.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 126.;"
AAA ATPase
PLM3_127_b2_sep16_scaffold_178_29
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30049..31626)
DNA (1578bp) protein (526aa)
Tax=CG_Delta_07
PLM3_127_b2_sep16_scaffold_178_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31767..33155
DNA (1389bp) protein (463aa)
Sulfatase Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4H1_9RHIZ
Sulfatase {ECO:0000313|EMBL:EHH13394.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sulfatase
Displaying items 1-30 of 84 in total

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