ggKbase home page

PLM3_127_b2_sep16_scaffold_573_25

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 26699..27175

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent DNA ligase LigA bin=GWC2_Nitrospirae_57_13 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 161.0
  • Bit_score: 139
  • Evalue 2.80e-30
Translation elongation factor-like protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 88.0
  • Bit_score: 84
  • Evalue 1.80e-14
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 164.0
  • Bit_score: 155
  • Evalue 4.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCTGCCGTAAAGAAACGCAAGGCCAAAGTCGTACGCAAGAAAATCGTAGCGAAGAAGCCGGCGGTCCGCAAGAAATCCGGTGCGCCGACGAAAGCTCAGGCGAGAAAGCCGGCGGCGAAGCCTGCCGCGCCAAAGCCGGCCCCGCGGCCATCGCCCAGGCCGGGCCCCGCAGCGGCGTCCGCTCAAACGGCCAAGCCCGAACCCCTGCCGGGCGAAGAGCGGGTGGGTGTCGTGACTCACTACTTCGGCCATCTTTCCGTCGCCGCCATACGGATCGAAACGGGCAGCCTGCGCGTCGGCGACACGATCCGCATCCTCGGGCACACGAGCGACTTCCGCCAGCGCGTCGATTCCATGCAGATCGAGCACCAGCCGGTTACCGAAGCCGGCAAGAGGCAGGAGATCGGCATCAAGGTGACCGAACACGCGCGCGAGAACGATGACGTGTACAAGGTGGTCGTCCCGAGGCCGTAG
PROTEIN sequence
Length: 159
MAAVKKRKAKVVRKKIVAKKPAVRKKSGAPTKAQARKPAAKPAAPKPAPRPSPRPGPAAASAQTAKPEPLPGEERVGVVTHYFGHLSVAAIRIETGSLRVGDTIRILGHTSDFRQRVDSMQIEHQPVTEAGKRQEIGIKVTEHARENDDVYKVVVPRP*