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PLM3_127_b2_sep16_scaffold_573

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_573_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..304
DNA (303bp) protein (101aa)
sulfatase Tax=Schlesneria paludicola RepID=UPI00029AF5B9
Uncharacterized protein {ECO:0000313|EMBL:ETX00581.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_573_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

377..1240
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Burkholderia sp. RPE64 RepID=R4WYX4_9BURK
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KGM31215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_573_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1549..2829
DNA (1281bp) protein (427aa)
Uncharacterized protein Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46775.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
citrate transporter
PLM3_127_b2_sep16_scaffold_573_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2842..5001
DNA (2160bp) protein (720aa)
N-methylhydaintoinase A Tax=Clostridium sp. D5 RepID=F0YWS8_9CLOT
N-methylhydaintoinase A {ECO:0000313|EMBL:EGB93416.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hydantoinase/oxoprolinase
PLM3_127_b2_sep16_scaffold_573_5
unknown

Not on your lists

4998..5585
DNA (588bp) protein (196aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_573_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5582..6685
DNA (1104bp) protein (368aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3D6_STAND
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADH89695.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_127_b2_sep16_scaffold_573_7
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6979..7983
DNA (1005bp) protein (335aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
Alpha/beta hydrolase family Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YZF8_9RHIZ
putative homoserine O-acetyltransferase
PLM3_127_b2_sep16_scaffold_573_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8066..8401
DNA (336bp) protein (112aa)
NIPSNAP family containing protein Tax=Oceanibaculum indicum P24 RepID=K2JQU7_9PROT
NIPSNAP family containing protein {ECO:0000313|EMBL:EKE77648.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
NIPSNAP family protein
PLM3_127_b2_sep16_scaffold_573_9
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

8520..9026
DNA (507bp) protein (169aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM3_127_b2_sep16_scaffold_573_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9180..9572
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Sphingobium lactosutens DS20 RepID=T0HQL6_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_573_11
unknown

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9710..10108
DNA (399bp) protein (133aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_573_12
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

10302..10832
DNA (531bp) protein (177aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
PLM3_127_b2_sep16_scaffold_573_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10984..12219)
DNA (1236bp) protein (412aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Putative carboxymethylenebutenolidase (Dienelactone hydrolase)(DLH) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJF9_9BRAD
Carboxymethylenebutenolidase {ECO:0000313|EMBL:KJC42893.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
PLM3_127_b2_sep16_scaffold_573_14
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12364..13101
DNA (738bp) protein (246aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI0002FC1738
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF35995.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
short-chain dehydrogenase of unknown substrate specificity
PLM3_127_b2_sep16_scaffold_573_15
Vibrio splendidus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13122..13460
DNA (339bp) protein (113aa)
UPF0060 membrane protein V12B01_25469 Tax=Vibrio RepID=A3UM08_VIBSP
UPF0060 membrane protein V12B01_25469 {ECO:0000256|HAMAP-Rule:MF_00010}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio splendidus 12B01.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_573_16
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13875..14135)
DNA (261bp) protein (87aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000363014C
XRE family transcriptional regulator
Tax=GWA2_Rhodocyclales_65_20_curated
PLM3_127_b2_sep16_scaffold_573_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14667..18098)
DNA (3432bp) protein (1144aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_573_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18210..19235)
DNA (1026bp) protein (342aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01665}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Heme A synthase Tax=Nitrosospira sp. APG3 RepID=M5DIJ2_9PROT
cytochrome oxidase assembly
PLM3_127_b2_sep16_scaffold_573_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(19316..20269)
DNA (954bp) protein (318aa)
id=14430153 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_573_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20476..22848
DNA (2373bp) protein (791aa)
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase Tax=Nitrosospira sp. APG3 RepID=M5DK61_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_573_21
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22862..23836
DNA (975bp) protein (325aa)
transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Transaldolase Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ42_ISOPI
PLM3_127_b2_sep16_scaffold_573_22
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23937..24461
DNA (525bp) protein (175aa)
endoribonuclease Tax=Salinispora arenicola RepID=UPI0002EC6466
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABW00424.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM3_127_b2_sep16_scaffold_573_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24687..25085
DNA (399bp) protein (133aa)
translation initiation inhibitor Tax=Gemmata obscuriglobus RepID=UPI00016C355B
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_573_24
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25294..26160
DNA (867bp) protein (289aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7C0L7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN67668.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_573_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26699..27175
DNA (477bp) protein (159aa)
NAD-dependent DNA ligase LigA bin=GWC2_Nitrospirae_57_13 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Translation elongation factor-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_573_26
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27387..28157
DNA (771bp) protein (257aa)
Oxidoreductase Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAG8_9GAMM
Oxidoreductase {ECO:0000313|EMBL:ETX08891.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
polysaccharide biosynthesis family protein
PLM3_127_b2_sep16_scaffold_573_27
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28232..28708
DNA (477bp) protein (159aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Methylglyoxal synthase Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YU92_9CHLB bin=RBG9 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG9 organism_group=Chloroflexi
methylglyoxal synthase
PLM3_127_b2_sep16_scaffold_573_28
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28744..29541
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase Tax=Cystobacter fuscus DSM 2262 RepID=S9R392_9DELT
Enoyl-CoA hydratase {ECO:0000313|EMBL:EPX63363.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
enoyl-CoA hydratase/isomerase
PLM3_127_b2_sep16_scaffold_573_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29561..30274
DNA (714bp) protein (238aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=Bradyrhizobium elkanii RepID=UPI0002D55CF3
Bradyrhizobium elkanii strain UASWS1015 Contig167, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51011.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_573_30
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30250..30807
DNA (558bp) protein (186aa)
Extracellular ligand-binding receptor Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J247_RHOP2
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
Displaying items 1-30 of 33 in total

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