ggKbase home page

PLM3_127_b2_sep16_scaffold_453_70

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 73722..74969

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Cupriavidus sp. HPC(L) RepID=V2I8A9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 420.0
  • Bit_score: 626
  • Evalue 1.10e-176
putative RNA polymerase ECF-type sigma factor containing TPR repeat similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 416.0
  • Bit_score: 606
  • Evalue 4.50e-171
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 414.0
  • Bit_score: 665
  • Evalue 3.10e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAGCGCGGATACCGCAGAACGTGCACGCGAGTTGGTGGACGCCGTCTACCGGGCCGAGTCGCGCCGAGTCCTTGCCACCTTGATCCGCTTGCTGGGCGATTTCGACCTCGCAGAGGAAGCGCTGCACGACGCATTCAGAGCAGCGATCGAGCAATGGCCGCGCGACGGCGTGCCCGATAATCCCCGCGCCTGGCTCGTATCGGCGGGCCGCTTCAAGGCCATCGACGGCATGCGCCGGAGTGCGCGGTTCAGTCCACTCGACGAAGACGCCGAGCAAATCGCGGCGCCAGACAATTCGGCGTCGTGGGCGAGCGAGGACATCGAGGACGACCGGCTGCGGCTGATCTTCACGTGCTGCCATCCGGCACTGCCTCCGGACGCGCAGGTGGCTTTGACACTGCGCGAGGTGTGTGGTCTCACGACGGAAGAAATCGCGCACGCGTTCCTCACCGCCGCCCCCACGCTGGCGCAGCGCATCGTGCGCGCCAAGAACAAGATCCGCGACGCGAAAATCCCCTACCAGTTGCCCTCGCAGGAGGATCTGCCGGAGCGGCTGGACAGTGTGCTGCGGGTGATCTACCTGGTATTCAACGAAGGCTATGTCGCGTCGTCGGGCGCGTCGCTGACGCGGCACGATCTCTCGGGCGAGGCGATACGCCTGGCGCGCCTGCTCACCGAGCTGTTGCCGGAGCCGGAGGCGAGGGGATTGCTCGCGCTGATGTTGCTGCACGAATCGCGGCGCGCCGCGCGTGCGTCGCCCACCGGCGATCTGATCCTGCTGGAGGACCAGGACCGTTCGCTTTGGAAGCGGGAAATGATCGCGGAGGGCACGGCACTGGTGGAGCGGGCGCTGTCGTCGCGCCGCATCGGTCCGTATACGCTGCAGGCGGCGATCTCGGCGGTGCACGCCGAGGCGCCGGACGCCGCGTCGACGGACTGGTCCCAGATCGTCGGCCTGTACGACGTGTTGGTGCGGGCGGAGCCCTCGCCGGTGGTGGAACTCAACCGCGCCGTGGCAGTGGCGATGCGCAATGGGCCCGCGGCAGGCCTCGCGCTGGTTGACGCCATCCTGGCGCGCGGCGACCTGTCGGACTACCGCCTCGCGCACGCGGCACGGGCGGACCTGTGCAGGCGTTTGGGGAAAACTGCCGAAGCCCGCGCGTCTTATCAGCGGGCCCTGGAGCTCACGCGGCAGGAGCCGGAGCGGCGGTTCCTCGAGCGTCGTCTTGCCGATCTGAAAATTTGA
PROTEIN sequence
Length: 416
MSADTAERARELVDAVYRAESRRVLATLIRLLGDFDLAEEALHDAFRAAIEQWPRDGVPDNPRAWLVSAGRFKAIDGMRRSARFSPLDEDAEQIAAPDNSASWASEDIEDDRLRLIFTCCHPALPPDAQVALTLREVCGLTTEEIAHAFLTAAPTLAQRIVRAKNKIRDAKIPYQLPSQEDLPERLDSVLRVIYLVFNEGYVASSGASLTRHDLSGEAIRLARLLTELLPEPEARGLLALMLLHESRRAARASPTGDLILLEDQDRSLWKREMIAEGTALVERALSSRRIGPYTLQAAISAVHAEAPDAASTDWSQIVGLYDVLVRAEPSPVVELNRAVAVAMRNGPAAGLALVDAILARGDLSDYRLAHAARADLCRRLGKTAEARASYQRALELTRQEPERRFLERRLADLKI*