ggKbase home page

PLM3_127_b2_sep16_scaffold_453_97

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(91897..93396)

Top 3 Functional Annotations

Value Algorithm Source
D-lactate dehydrogenase (cytochrome) (EC:1.1.2.4) similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 480.0
  • Bit_score: 703
  • Evalue 3.30e-200
Glycolate dehydrogenase, subunit GlcD Tax=Nitrosospira sp. APG3 RepID=M5DQD4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 480.0
  • Bit_score: 706
  • Evalue 1.00e-200
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KIO49638.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 484.0
  • Bit_score: 711
  • Evalue 6.00e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGGCAAGCCCGAACTGCTTTCGTCCGAAACGCTGCAACCGCAGATCTCCAAGGCGGAACTGATCCAGCAGCTCTCTGCGATCCTTGCGCCGGATGCACTGCTGCATCAGCACGAGGAACTCAAACCCTTCGAGTGCGACGGCCTGACCGCCTACCAGCGCATGCCGCTCCTGGTGGCGCTGCCCGAGAACGAGGAGCAGGTACGCGCGATCCTTCGTATCTGCCACGCAGGCCGGGTGCCGGTGGTGTTCCGCGGCGCCGGAACCGGCTTGTCGGGCGGGGCCCTTCCCTACGAACACGGGCTGCTGCTGGTCATGTCGAAGATGAAGACAATCCTGGAGATCGACGCGCCGGCGCGCATCGCGCGCGTGCAGCCGGGGGTGCGCAACGCTGCGATCTCCGAAGCGACCGCGCCCCTCGGCCTGTACTACGCTCCCGATCCCTCCAGCCAGATCGCCTGCTCGATCGGCGGCAACGTCGCCGAGAATTCAGGAGGCGTGCACTGCCTGAAGTACGGGCTCACGGTGCACAACATCCTCAAGGTGCGGTTCGTCACCATCGAGGGAGATCTGCTCGAGATCGGCTCCGAAGGGCTCGATTCGCCGGGTTACGACCTGCTGGCGCTAATCACCGGGTCGGAAGGCCTGCTCGGCGTGGTCACCGAGATCACCGTCAAGCTGCTGCCAAAGCCGGAGAAGGCGCAGGTGGTGCTGGTAGCGTTCGACGACGTTGCCAAGGCTGCCCAGGCGGTAGCGGACGTCATTGCCGCCGGCATCATTCCCGCCGGCCTGGAGATGATGGACAGAAAGGCCACCGCCGCGGTGGAGCAATTCGTCCATGCCGGCTATCCGCTCGATGCCGCCGCCATCCTGCTGTGCGAATCCGACGGCACCGAAGAAGAAGTGACGGCGGAAATCGGCCGCGTAACCGAGGTGATGCGCAAGGCCGGCGCGACCGAGATCCGCACTTCACGGGATGAAGCCGATCGGCTGAAACTGTGGGCCGGGCGCAAGGCCGCCTTCCCCGCGGTGGGCCGCATCCTGCCCGATTACTACTGCATGGACGGCACCATCCCGCGCAAGCATCTACCCTATGTGCTCAAGCGCATCGACGAGCTGTCCGGAAAATTCAACCTGCAGTGCGCCAACGTTTTCCATGCCGGGGACGGCAACCTGCACCCGCTGATCATGTTCGATGCCAACGACGACGACCAGATGCGGCGCGCCGAGGCCTACGGAGCGGCAATCCTGGAATTGTGCGTCGAGGTCGGCGGCACCATCACCGGCGAGCACGGCGTGGGCATCGAGAAGATCAACCAGATGTGCCTGCAGTTCAGGACCCGAGAACTGGAAACCTTCCATGCGGTGAAGCACGTGTTCGACGAGCACGGTCTGCTCAATCCCGGCAAGGCCGTGCCCACGCTGCAGCGCTGCGCCGAGTTCGGCGCCATGCACGTGCGTCGCGGCAAAGAGAAGTTCCCCGACCTGCCCCGTTTCTAG
PROTEIN sequence
Length: 500
MGKPELLSSETLQPQISKAELIQQLSAILAPDALLHQHEELKPFECDGLTAYQRMPLLVALPENEEQVRAILRICHAGRVPVVFRGAGTGLSGGALPYEHGLLLVMSKMKTILEIDAPARIARVQPGVRNAAISEATAPLGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNILKVRFVTIEGDLLEIGSEGLDSPGYDLLALITGSEGLLGVVTEITVKLLPKPEKAQVVLVAFDDVAKAAQAVADVIAAGIIPAGLEMMDRKATAAVEQFVHAGYPLDAAAILLCESDGTEEEVTAEIGRVTEVMRKAGATEIRTSRDEADRLKLWAGRKAAFPAVGRILPDYYCMDGTIPRKHLPYVLKRIDELSGKFNLQCANVFHAGDGNLHPLIMFDANDDDQMRRAEAYGAAILELCVEVGGTITGEHGVGIEKINQMCLQFRTRELETFHAVKHVFDEHGLLNPGKAVPTLQRCAEFGAMHVRRGKEKFPDLPRF*