ggKbase home page

PLM3_127_b2_sep16_scaffold_720_23

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 22565..23956

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system, outer membrane lipoprotein bin=GWB2_Desulfobacterales_56_26 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 452.0
  • Bit_score: 411
  • Evalue 6.50e-112
NodT family efflux transporter outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 455.0
  • Bit_score: 361
  • Evalue 2.20e-97
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 457.0
  • Bit_score: 497
  • Evalue 1.30e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAGTAGCCTTCCGAGCACCGTATTGCGCGCCGCCGCCGCGGGGCTGTTGCTGATCGCTGCAGGATGCGCGTTGAAGTTTCCGCCCGATCGCGAAGCACTCGACAAGGAAGCGCTGGGCAAGGCTGTGCCGCCGGCGCTCTGGAACGCCGGCGGGGGTGCGCCGGGTGCGGTGGCCGATGGCTGGCTTAAAAATTTCAACGAGCCGCGGCTCGAGGCACTCGTCAATGAGGCGCTCACGCGCAACGTCAACCTCCGCATTGCCGCCACTCGCGTCGAGCAAGCCCGGGCTTCCCTCAAGATCGCGGGCGGCGCGCTCACCCCGGCGGTGAACCTTCTGGCACGCGGCGGCGGCGATCTAGGCGGCGATGGCTCGGGGCTGAGCGGCGTGCTGCTGAACGCGTCCTGGGAGGTCGACCTGTGGGGCCGTGTGCGCTACGGCCAGCGCGCCGCGTCCGGTCAGCTTGCCTCTGTCGAGGCTGATTACGCTTACGCTCGGCAGTCGATGGCGGCGCTGGTGGCGAAGAGCTGGTTTGTCGCGGCGGAAAGCGCGTTGCAGCGGCAGCTTGCGCGTGACATGCTTGCCGTAGCCGAGCGTCTCGTCGAACTGGCGCAAGTGCGTCGCCGGGTAGGCAATGGAGACGAAATGGATGTGGTGCTTGCCCAGGCCAATGTCCAGAGCTACCGCGATGGACTGCGGAAGCTCGATCTTGCGCGCGAGCAGGCGCTGCGCTCGCTGGAAATGCTGGCCGGACGCTATCCCGCTGCGACGCTGGAGGCCACCGACGCGCTGCCGCCATTGCCCCCACCCATTACGGCCGGCATTCCCTCGGAGCTGCTCGAGCGCCGCCCGGACGTAGTGGCCGCCGAACGGCGCGTGGCCGCAGCCTTTGACCGCGTGCAGGAAGCAAAGACCGCGCGATTGCCACGCATCAGCCTGACCGCGGGACTGGCGTCGATTACCAGTGATCTTTTCGTGCTGCAGGATCGCGACAATCCGAGCCTGACGGGAGGCGCCATGGTCACGCTCCCGCTCTTTACCGGCGGGACGCTCGAAGGTCAGGTCGAGTTGCGCACTGCCGAACAGAAACAGGCCGTGGCGGAGTATGCAGCCACAGGGCTCAATGCCTTCAACGAAGTGGAATCCACGCTCGCCAATGAATCGGCGTTGACCGACCGGCAGACGATGCTCGAGCAGCTGGTCGCGCAGAATCAGCGCGCACTCGCGCTGTCGGAAATCAGGTATCGGGTCGGCAGCGCAGACCTGCGCGCAGTCCTCAACGACCAATTGAGGGTCTACAGCTCACGCACGCAACTGGTGCGCGTGCAGGCCGAGCGCTTCGTCCAGCGCGTGAACCTGCATCTGGCACTCGGCGGCAGCTATGCAAGTTGA
PROTEIN sequence
Length: 464
MSSLPSTVLRAAAAGLLLIAAGCALKFPPDREALDKEALGKAVPPALWNAGGGAPGAVADGWLKNFNEPRLEALVNEALTRNVNLRIAATRVEQARASLKIAGGALTPAVNLLARGGGDLGGDGSGLSGVLLNASWEVDLWGRVRYGQRAASGQLASVEADYAYARQSMAALVAKSWFVAAESALQRQLARDMLAVAERLVELAQVRRRVGNGDEMDVVLAQANVQSYRDGLRKLDLAREQALRSLEMLAGRYPAATLEATDALPPLPPPITAGIPSELLERRPDVVAAERRVAAAFDRVQEAKTARLPRISLTAGLASITSDLFVLQDRDNPSLTGGAMVTLPLFTGGTLEGQVELRTAEQKQAVAEYAATGLNAFNEVESTLANESALTDRQTMLEQLVAQNQRALALSEIRYRVGSADLRAVLNDQLRVYSSRTQLVRVQAERFVQRVNLHLALGGSYAS*