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PLM3_127_b2_sep16_scaffold_720

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_720_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3..464
DNA (462bp) protein (154aa)
ABC transporter, periplasmic branched chain amino acid binding protein bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_720_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

649..1596
DNA (948bp) protein (316aa)
ABC transporter permease Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003652E6C
branched-chain amino acid ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_720_3
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1646..2908
DNA (1263bp) protein (421aa)
ABC transporter permease Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000366E7A0
ABC transporter permease {ECO:0000313|EMBL:EYS92855.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
ABC transporter permease
PLM3_127_b2_sep16_scaffold_720_4
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2905..3657
DNA (753bp) protein (251aa)
Putative ABC-type branched-chain amino acid transporter, atp_binding component Tax=Ralstonia syzygii R24 RepID=G3A7M8_9RALS
Putative ABC-type branched-chain amino acid transporter, atp_binding component {ECO:0000313|EMBL:CCA86512.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
putative ABC-type branched-chain amino acid transporter, atp_binding component
PLM3_127_b2_sep16_scaffold_720_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3910..4605
DNA (696bp) protein (232aa)
ABC transporter related protein bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_720_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4811..6910
DNA (2100bp) protein (700aa)
Peroxisomal bifunctional enzyme bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-hydroxyacyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_720_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..8294
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
acetyl-CoA acetyltransferase Tax=Herbaspirillum sp. JC206 RepID=UPI0002FE4DDF
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_720_8
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8449..10263
DNA (1815bp) protein (605aa)
acyl-CoA dehydrogenase Tax=Herbaspirillum sp. JC206 RepID=UPI0002FE79DB
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_720_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10469..11245
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7B9W7_MEISD
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_720_10
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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11250..11657
DNA (408bp) protein (136aa)
Thioesterase superfamily protein Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3J4_PSEUL
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:BAK76639.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
PLM3_127_b2_sep16_scaffold_720_11

Not on your lists

11889..12869
DNA (981bp) protein (327aa)
Lipolytic enzyme Tax=uncultured bacterium RepID=B8Y559_9BACT
Carboxylesterase {ECO:0000313|EMBL:AJG38111.1}; species="Bacteria; Tenericutes; environmental samples.;" source="Tenericutes bacterium enrichment culture clone fosmid MGS-B1.;"
esterase/lipase
PLM3_127_b2_sep16_scaffold_720_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12881..13645
DNA (765bp) protein (255aa)
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Hydrogenophaga sp. PBC RepID=I4MLJ6_9BURK
Oxidoreductase {ECO:0000313|EMBL:EYC50081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
short-chain dehydrogenase
PLM3_127_b2_sep16_scaffold_720_13
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(13702..14997)
DNA (1296bp) protein (432aa)
Carboxypeptidase Tax=Cupriavidus sp. HPC(L) RepID=V2GA95_9BURK
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:KER10223.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
N-acetyl-L,L-diaminopimelate deacetylase
PLM3_127_b2_sep16_scaffold_720_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15168..15689
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2J0A8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76316.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_720_15
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15738..16808
DNA (1071bp) protein (357aa)
Sodium/calcium exchanger membrane region Tax=Burkholderia sp. YI23 RepID=G8MES1_9BURK
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AET91049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
PLM3_127_b2_sep16_scaffold_720_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17251..18249)
DNA (999bp) protein (333aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Thiomonas intermedia (strain K12) RepID=D5X1G9_THIK1
alcohol dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_720_17
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18331..18660
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Gordonia soli NBRC 108243 RepID=M0QMI7_9ACTO
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_720_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18720..19328
DNA (609bp) protein (203aa)
Putative uncharacterized protein Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W40_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ25631.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio; psychroerythus).;"
PLM3_127_b2_sep16_scaffold_720_19
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19744..20319
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AL09_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK98029.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM3_127_b2_sep16_scaffold_720_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20403..20657
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Pseudomonas sp. (strain M1) RepID=L1I1S8_PSEUO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_720_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20821..21336
DNA (516bp) protein (172aa)
Putative uncharacterized protein bin=GWB2_Desulfobacterales_56_26 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:EDY20861.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_720_22
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21336..22550
DNA (1215bp) protein (405aa)
Multidrug resistance efflux pump Tax=Cystobacter fuscus DSM 2262 RepID=S9PKL3_9DELT
Multidrug transporter {ECO:0000313|EMBL:KJR99086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
multidrug resistance efflux pump
PLM3_127_b2_sep16_scaffold_720_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22565..23956
DNA (1392bp) protein (464aa)
NodT family RND efflux system, outer membrane lipoprotein bin=GWB2_Desulfobacterales_56_26 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
NodT family efflux transporter outer membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_720_24
unknown

Not on your lists

comp(24199..24510)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_720_25
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24507..25409)
DNA (903bp) protein (301aa)
Putative hydroxylase Tax=Gluconobacter morbifer G707 RepID=G6XFM8_9PROT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:GAN53872.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
lactoylglutathione lyase family protein
PLM3_127_b2_sep16_scaffold_720_26
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25733..26359)
DNA (627bp) protein (209aa)
Ion transport 2 domain protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIZ6_DESAR
Ion transport 2 domain-containing protein
Ion transport 2 domain protein {ECO:0000313|EMBL:AEB10761.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM3_127_b2_sep16_scaffold_720_27
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26755..27774
DNA (1020bp) protein (340aa)
Membrane protein Tax=Pandoraea RepID=V5UKU2_9BURK
membrane protein
Tax=CG_Syntroph_02
PLM3_127_b2_sep16_scaffold_720_28
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

27771..29132
DNA (1362bp) protein (454aa)
Glycine/D-amino acid oxidase (Deaminating) Tax=delta proteobacterium BABL1 RepID=V6DH07_9DELT
puuB; Glycine/D-amino acid oxidase (deaminating)
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
PLM3_127_b2_sep16_scaffold_720_29
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

29279..29929
DNA (651bp) protein (217aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003697443
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM3_127_b2_sep16_scaffold_720_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29954..31063
DNA (1110bp) protein (370aa)
Calcium/proton antiporter, CaCA family Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFT4_DESAR
Cation transporter {ECO:0000313|EMBL:KIC90798.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
CaCA family calcium/proton antiporter
Displaying items 1-30 of 37 in total

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