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PLM3_127_b2_sep16_scaffold_904_4

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2808..4151)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 434.0
  • Bit_score: 719
  • Evalue 1.50e-204
Ribosomal protein S12 methylthiotransferase RimO Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RIMO_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 434.0
  • Bit_score: 719
  • Evalue 1.10e-204
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 434.0
  • Bit_score: 719
  • Evalue 3.00e-205

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGACCGCCGTCAAGACCCGCAAGCCCGCCGCTGCATCGCCCAGGGTAGGCTTCGTTTCCCTCGGCTGTCCGAAGGCGCTGGTCGATTCCGAGCGCATCCTCACCCAGCTCCGTGCCGAGGGATATCTGATCTCCCGCAGCTACCGGGATGCCGATCTCGTCGTCGTCAACACCTGCGGCTTCATCGATGCCGCGGTGGAGGAATCGCTGGACGCGATCGGCGAGGCGCTCGCGGAAAACGGCAAAGTCATCGTCACCGGTTGCCTGGGCGCCAAGGGCAGCGTGGTCAAGGACGCGCACCCGCGAGTGCTGGCAGTCACCGGCCCGCACGCCACCGAGGAAGTGATGAGCGCGGTGCATTCGCACCTGCCCAACCCACACGATCCTTTCGTCGATCTCGTGCCGCCGCAGGGCATCAAGCTCACCCCGAAGCACTTCGCGTATCTGAAAATCGCCGAGGGCTGCAACCATCGCTGCACCTTCTGCATCATCCCCTCGATGCGCGGTGACCTGGTGAGCCGCCCTGTGGGCGAAGTCATGCAGGAAGCCGAGAACCTGGTAAGAGCCGGGGTGAAGGAACTGTTGGTGATCTCGCAGGACACCAGCGCCTACGGCGTGGACATTCGCTACCGAACCGGGTTCTGGGGCGGGCGCCCGCTGAAAACGCGCATGACCGAACTGACCCGCGCGCTCGGCGATCTCGGCGTGTGGGTGCGACTGCATTACGTCTACCCCTACGCGCACGTGGACGAAATCGTGCCGCTGATGGCGGACGGCAAGGTCCTGCCCTATCTCGATGTGCCGTTTCAGCACGCCAGCCCGCGCATCCTCAAGCTCATGAAGCGCCCGGCCAACGCCGAGAACAATCTCGAACGCATCCGCGCGTGGCGCGAAATCTGCCCCGACATCACCATCCGCAGCACGTTCATCGCCGGTTTTCCGGGCGAAACCGAAGCGGAATTCGAAGAACTGCTGCAGTTCCTCGAGGAGGTGCAACTCGATCGCGTCGGCTGTTTCGCCTATTCGCCGGTGGACGGCGCCGCCGCCAATGCCCTGCCCGATCCAGTCCCACAAGAAGTCAGGGAAGAACGCCGCGCCCGCTTCATGGCGGTCCAGGAGAAAATCAGCGCGCGCCGGTTGCAGCAGAAAATCGGCAGGACCCTTGCGGTCCTGATCGACGAGTCCGGCAAAAAAGGCGCGGTCGGCCGCTCCAGCGCCGATGCGCCCGAGATCGATGGCGTGGTGCACATCAAGAAAGCCAACGGGCTCAATGCCGGCGATTTCGTGCAGGTGCGCGTCACGCGCAGCGACGCCCACGACCTGTACGGCGAGATCGCCGCGTAG
PROTEIN sequence
Length: 448
MTAVKTRKPAAASPRVGFVSLGCPKALVDSERILTQLRAEGYLISRSYRDADLVVVNTCGFIDAAVEESLDAIGEALAENGKVIVTGCLGAKGSVVKDAHPRVLAVTGPHATEEVMSAVHSHLPNPHDPFVDLVPPQGIKLTPKHFAYLKIAEGCNHRCTFCIIPSMRGDLVSRPVGEVMQEAENLVRAGVKELLVISQDTSAYGVDIRYRTGFWGGRPLKTRMTELTRALGDLGVWVRLHYVYPYAHVDEIVPLMADGKVLPYLDVPFQHASPRILKLMKRPANAENNLERIRAWREICPDITIRSTFIAGFPGETEAEFEELLQFLEEVQLDRVGCFAYSPVDGAAANALPDPVPQEVREERRARFMAVQEKISARRLQQKIGRTLAVLIDESGKKGAVGRSSADAPEIDGVVHIKKANGLNAGDFVQVRVTRSDAHDLYGEIAA*