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PLM3_127_b2_sep16_scaffold_1228_25

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(20885..21394)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor RpoE negative regulatory protein RseA Tax=Nitrosospira sp. APG3 RepID=M5DIT8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 179.0
  • Bit_score: 130
  • Evalue 1.10e-27
anti sigma-E protein, RseA similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 165.0
  • Bit_score: 120
  • Evalue 4.00e-25
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 174.0
  • Bit_score: 169
  • Evalue 3.70e-39

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Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGAGCGAATCTCTGCATTCATGGATGGCGAACTCGAGGACCACGAGGCCGCCGGTCAGGTGAGGCGGCTGAAGGAAGATCCGGAGCTGCGTGCAGCCTGGGAGACCTACCATCTGATCGGAGATGCCATGCGCGGTGAAGCGGGGTATTCATCCGGACTGGTGGTCAAGATCAGCGCCAGGCTCGCCGCGGAGCCCACGGTGCTGGCGCCCAGGACACGGATGCAGTCGCGAAACGTCCGCCGCGTGGCGCTTTCGGCGGCCGCGTCGATCTGCGGCGTGGCGCTGGTCGCGTGGCTCGCCCTGTTCGACAATCCCTTCGCTCCCCGGCAAAACCTCGCGGTCAATCAGGCGCCACCGGGCGCCCAGACCCAGTTGACCGCCACGCCGGCCAACGGCGCCGTCAACGACTACCTGCTCGCGCATCAGCAGTTTTCCCCCAACACGGCGATGCAGGGTGTGGCTTCTTACGTCCGGACCGTATCCGGGCAGAATCCGGAACAGCGTTGA
PROTEIN sequence
Length: 170
MERISAFMDGELEDHEAAGQVRRLKEDPELRAAWETYHLIGDAMRGEAGYSSGLVVKISARLAAEPTVLAPRTRMQSRNVRRVALSAAASICGVALVAWLALFDNPFAPRQNLAVNQAPPGAQTQLTATPANGAVNDYLLAHQQFSPNTAMQGVASYVRTVSGQNPEQR*