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PLM3_127_b2_sep16_scaffold_1363_16

Organism: PLM3_127_b2_sep16_Betaproteobacteria_Methylophilales_62_20

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(18585..19124)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 154
  • Evalue 7.70e-35
2'-5' RNA ligase Tax=Thauera sp. 63 RepID=N6YJN3_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 154
  • Evalue 5.50e-35
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 147
  • Evalue 3.30e-33

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Taxonomy

Thauera sp. 63 → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
TTGAATCCGCAAAGATTGCGCGTTTTTTACGCGCTGTGGCCGGATCGGAGCGTCAACAGTGCTCTTGCCGAAACGGCGCGACGCTTGCATCGCGTGGTCGGCGGCAGACGCGCCCGCGATGACAGCATTCACCTCACGCTCGCTTTTGTCGGTGACGTTGACAGCGTTCGGCTCCCAGAATTGCTGGCGCCGCCGGCTGTGTTGACCGTTGCCCGGTTCACGCTGACGCTCGACAGCTGGGGTTGTTGGCCGCGCAACGGTATCGCGTGGGTTGGGCCGTCGCGCGTCCCCGATCCGCTGCGCGAACTGGCTGCGGGACTGGAAGCCTGGTTGCGCGACGCGGGATTCGAGATGGATGTTGGGCCCTTCAATCCGCACGTAACGCTGGTCAGGAAGGCGCAGTGTGCGCCCTTGCCCCACTCGACGCCGTGCATAGAGTGGCAGATAGAGGACTTTGTTCTGGTGCGATCGGCGCTCGCGCCCGACGGCTCACGCTATGAAACCATCGGCCGCTGGCCTTTGTTGAACGCGCATTCTTAA
PROTEIN sequence
Length: 180
LNPQRLRVFYALWPDRSVNSALAETARRLHRVVGGRRARDDSIHLTLAFVGDVDSVRLPELLAPPAVLTVARFTLTLDSWGCWPRNGIAWVGPSRVPDPLRELAAGLEAWLRDAGFEMDVGPFNPHVTLVRKAQCAPLPHSTPCIEWQIEDFVLVRSALAPDGSRYETIGRWPLLNAHS*