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PLM3_127_b2_sep16_scaffold_5411

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5411_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5411_2
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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105..908
DNA (804bp) protein (268aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJR8_9GAMM
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_5411_3
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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1090..2793
DNA (1704bp) protein (568aa)
hypothetical protein Tax=Microbacterium barkeri RepID=UPI0002F7B584
ABC-type dipeptide transport system, periplasmic component
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_5411_4
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2864..3841
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CC01_RHILT
dipeptide/oligopeptide ABC transporter permease protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_5411_5
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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3909..4874
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component Tax=Firmicutes bacterium CAG:238 RepID=R6E2E5_9FIRM
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_5411_6
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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4969..6048
DNA (1080bp) protein (360aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit bin=GWC2_Chloroflexi_73_18 species=unknown genus=Staphylothermus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
oligopeptide/dipeptide ABC transporter, ATPase subunit
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_5411_7
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6048..7160
DNA (1113bp) protein (371aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XQQ1_9CREN
oligopeptide/dipeptide ABC transporter ATPase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_5411_8
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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7215..7589
DNA (375bp) protein (125aa)
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_5411_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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7666..8379
DNA (714bp) protein (238aa)
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_5411_10
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(8339..9259)
DNA (921bp) protein (307aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_5411_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9256..9684)
DNA (429bp) protein (143aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9690..10700)
DNA (1011bp) protein (337aa)
atm:ANT_15760 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10815..11999
DNA (1185bp) protein (395aa)
Metalloendopeptidase-like membrane protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GN05_9CYAN
peptidase M23B
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(11989..12417)
DNA (429bp) protein (143aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IF73_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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12759..13415
DNA (657bp) protein (219aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N665_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13427..13729
DNA (303bp) protein (101aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila UNI-1 RepID=E8N666_ANATU bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_17
unknown

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13744..13992
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5411_18
Thermobaculum terrenum, Thermobaculum, Bacteria

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13985..15493
DNA (1509bp) protein (503aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
ATP synthase subunit alpha Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDI2_THET1
PLM3_127_b2_sep16_scaffold_5411_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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15588..16481
DNA (894bp) protein (298aa)
atm:ANT_13780 atpG; ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
atpG; ATP synthase subunit gamma (EC:3.6.3.14)
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_5411_20
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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16492..17889
DNA (1398bp) protein (466aa)
atpD; ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_03
PLM3_127_b2_sep16_scaffold_5411_21
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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17957..18403
DNA (447bp) protein (149aa)
atpC; ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_16_Chloroflexi_51_16_curated
PLM3_127_b2_sep16_scaffold_5411_22
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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18410..18619
DNA (210bp) protein (70aa)
Rod shape-determining protein MreB Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4P5_ANATU
mreB; rod shape-determining protein MreB
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_5411_23
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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18604..19416
DNA (813bp) protein (271aa)
Rod shape-determining protein MreB bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
mreB; rod shape-determining protein MreB
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_5411_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(19507..20121)
DNA (615bp) protein (205aa)
rex; redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rex; redox-sensing transcriptional repressor Rex
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_5411_25
unknown

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20382..20597
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 25 items

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