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PLM3_127_b2_sep16_scaffold_2938

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2938_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(188..1216)
DNA (1029bp) protein (343aa)
Putative basic membrane lipoprotein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZZ6_ANATU
putative basic membrane lipoprotein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_2938_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1277..2068)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N7T7_9ACTO
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_2938_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2160..2303)
DNA (144bp) protein (48aa)
Zinc-binding CMP/dCMP deaminase Tax=Stenotrophomonas maltophilia RepID=G0K3I0_STEMA
zinc-binding CMP/dCMP deaminase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_2938_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2300..2494)
DNA (195bp) protein (65aa)
codA; cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase Tax=Xanthomonas campestris RepID=G0CGH5_XANCA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_2938_5
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(2579..4948)
DNA (2370bp) protein (790aa)
Putative competence protein ComEC bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
comEC; competence protein ComEC
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_2938_trna_1
unknown

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5084..5156
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_2938_trna_2
unknown

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5230..5302
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_2938_6
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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5845..8511
DNA (2667bp) protein (889aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3T6_ANATU
PLM3_127_b2_sep16_scaffold_2938_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8524..11172
DNA (2649bp) protein (883aa)
Suspect SCG annotation. See neighboring gene [PLM3_127_b2_sep16_scaffold_2938_6].
Leucine--tRNA ligase bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
leucyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_127_b2_sep16_scaffold_2938_8
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(11181..12020)
DNA (840bp) protein (280aa)
Alpha/beta hydrolase fold protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHM6_THET1
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACZ43247.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3_127_b2_sep16_scaffold_2938_9
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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12076..14067
DNA (1992bp) protein (664aa)
Peptidase S9A/B/C family, catalytic domain protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUG0_9BACT
Peptidase S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:BAL60160.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
PLM3_127_b2_sep16_scaffold_2938_10
unknown

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14156..15469
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C5796
Displaying 12 items

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