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PLM3_127_b2_sep16_scaffold_4329

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4329_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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2..1276
DNA (1275bp) protein (425aa)
atm:ANT_11560 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_2
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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1338..1658
DNA (321bp) protein (107aa)
ArsR family transcriptional regulator bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative transcriptional regulator
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_127_b2_sep16_scaffold_4329_3
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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2095..4446
DNA (2352bp) protein (784aa)
Cadmium-translocating P-type ATPase bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cadmium-translocating P-type ATPase
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_4329_4
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4460..4804
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Pseudomonas sp. (strain TJI-51) RepID=F0ECF9_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB95906.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4329_5
unknown

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4815..5222
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4329_6
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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5231..5557
DNA (327bp) protein (109aa)
hypothetical protein; K09771 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_4329_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5567..6172)
DNA (606bp) protein (202aa)
Two component transcriptional regulator, LuxR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7Y3_9CHLR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFH79994.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
response regulator receiver protein
PLM3_127_b2_sep16_scaffold_4329_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6169..7437)
DNA (1269bp) protein (423aa)
Integral membrane sensor signal transduction histidine kinase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM92_9CHLR
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EFH86892.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
histidine kinase
PLM3_127_b2_sep16_scaffold_4329_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7488..8048)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1J9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82643.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4329_10
unknown

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8078..8185
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4329_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8311..8667
DNA (357bp) protein (119aa)
putative ArsR family transcriptional regulator bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ArsR family transcriptional regulator
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_4329_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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8689..9243
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3Q4_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_4329_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

9278..11377
DNA (2100bp) protein (700aa)
Copper-transporting ATPase CopA Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4G9_CALAS
copA; copper-transporting ATPase CopA
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_4329_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

11574..12266
DNA (693bp) protein (231aa)
transcriptional regulatory protein degU bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
transcriptional regulatory protein degU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12268..13326
DNA (1059bp) protein (353aa)
atm:ANT_11580 putative two-component sensor histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative two-component sensor histidine kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13429..14559
DNA (1131bp) protein (377aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXK8_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14635..15897
DNA (1263bp) protein (421aa)
atm:ANT_20640 response regulator receiver protein; K02282 pilus assembly protein CpaE bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
response regulator receiver protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

15937..17367
DNA (1431bp) protein (477aa)
atm:ANT_20650 putative type II/IV secretion system protein; K02283 pilus assembly protein CpaF bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative type II/IV secretion system protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4329_19
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

17401..17913
DNA (513bp) protein (171aa)
Putative bacterial type II secretion system protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXL1_ANATU
putative bacterial type II secretion system protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Displaying 19 items

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