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PLM3_127_b2_sep16_scaffold_4530

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4530_1
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..464)
DNA (462bp) protein (154aa)
transposase Tax=Methylomonas sp. MK1 RepID=UPI0003799AF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG00188.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
PLM3_127_b2_sep16_scaffold_4530_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(673..2163)
DNA (1491bp) protein (497aa)
atm:ANT_14180 putative tRNA nucleotidyltransferase; K00970 poly(A) polymerase [EC:2.7.7.19] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative tRNA nucleotidyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_3
unknown

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comp(2180..2275)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4530_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2279..2833)
DNA (555bp) protein (185aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase Tax=Anaerolinea thermophila UNI-1 RepID=E8N4T1_ANATU bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2855..3439)
DNA (585bp) protein (195aa)
tdk; thymidine kinase (EC:2.7.1.21)
Thymidine kinase bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(3522..3998)
DNA (477bp) protein (159aa)
50S ribosomal protein L31 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZJ2_ANATU bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpmE; 50S ribosomal protein L31
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4230..4529)
DNA (300bp) protein (100aa)
50S ribosomal protein L27 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B6AA4D
rpmA; 50S ribosomal protein L27
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4543..4854)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B371A6
rplU; 50S ribosomal protein L21
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(5080..7137)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=uncultured crenarchaeote MCG genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_4530_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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7273..7473
DNA (201bp) protein (67aa)
50S ribosomal protein L34 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
rpmH; 50S ribosomal protein L34
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_11
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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7479..7823
DNA (345bp) protein (115aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ribonuclease P protein component
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_4530_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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7816..8106
DNA (291bp) protein (97aa)
Putative membrane protein insertion efficiency factor Tax=uncultured bacterium RepID=K2CTR6_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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8126..9301
DNA (1176bp) protein (392aa)
Serine/threonine protein kinase Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4Z2_HALMD
serine/threonine protein kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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9304..10098
DNA (795bp) protein (265aa)
hypothetical protein; K03217 preprotein translocase subunit YidC bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10197..10703
DNA (507bp) protein (169aa)
hypothetical protein; K06346 spoIIIJ-associated protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_16
unknown

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comp(10902..11465)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4530_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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11467..12249
DNA (783bp) protein (261aa)
Chromosome partitioning protein ParA Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4R2_ANATU
parA; chromosome partitioning protein ParA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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12239..13084
DNA (846bp) protein (282aa)
atm:ANT_13970 parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
parB; chromosome partitioning protein ParB
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

13125..14501
DNA (1377bp) protein (459aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_20
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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14564..15547
DNA (984bp) protein (328aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase Tax=uncultured Chloroflexi bacterium PF7_9CHLR">RepID=H5SPF7_9CHLR
PLM3_127_b2_sep16_scaffold_4530_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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15637..16485
DNA (849bp) protein (283aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_4530_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16539..17078)
DNA (540bp) protein (180aa)
Lipolytic protein G-D-S-L family Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIA2_STRM5
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACF53066.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Displaying 22 items

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