ggKbase home page

PLM3_127_b2_sep16_scaffold_7172

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7172_1
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3_127_b2_sep16_scaffold_7172_2
unknown

Not on your lists

comp(646..807)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7172_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(969..1925)
DNA (957bp) protein (319aa)
Helix-turn-helix type 11 domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G1_SPHTD
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:ACZ39807.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_7172_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

2312..2647
DNA (336bp) protein (112aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH45_THET1
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ACZ43066.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3_127_b2_sep16_scaffold_7172_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2644..3945)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7172_6
unknown

Not on your lists

comp(3980..5368)
DNA (1389bp) protein (463aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7172_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

5479..5901
DNA (423bp) protein (141aa)
transmembrane_regions 4..23 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7172_8
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

5888..7243
DNA (1356bp) protein (452aa)
selA; L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_7172_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

7295..7546
DNA (252bp) protein (84aa)
Putative uncharacterized protein Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKU1_HYPBU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7172_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

7638..8969
DNA (1332bp) protein (444aa)
atm:ANT_12000 putative M24B family peptidase (EC:3.4.-.-); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative M24B family peptidase (EC:3.4.-.-)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_7172_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

9022..9192
DNA (171bp) protein (57aa)
atm:ANT_12010 gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
O-sialoglycoprotein endopeptidase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7172_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists


9277..10023
DNA (747bp) protein (249aa)
atm:ANT_12010 gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7172_13
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

10020..10805
DNA (786bp) protein (262aa)
Short-chain dehydrogenase bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
short-chain dehydrogenase
Tax=CG_Anaero_01
Displaying 13 items

View Taxonomy