ggKbase home page

PLM3_127_b2_sep16_scaffold_7940

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7940_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3..548)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IC66_PHYMF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_7940_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(665..1678)
DNA (1014bp) protein (338aa)
fatty acid desaturase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002629255
fatty acid desaturase
Tax=RBG_16_Spirochaete_67_19_curated
PLM3_127_b2_sep16_scaffold_7940_3
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1892..2257)
DNA (366bp) protein (122aa)
Alpha-L-rhamnosidase Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZW22_MAHA5
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AEE96402.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
PLM3_127_b2_sep16_scaffold_7940_4
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

2334..3431
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003666A6E
Predicted dehydrogenases and related proteins
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM3_127_b2_sep16_scaffold_7940_5
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

3478..4563
DNA (1086bp) protein (362aa)
FG-GAP repeat protein bin=GWF2_Lentisphaerae_49_21 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_7940_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4664..5614)
DNA (951bp) protein (317aa)
Phytanoyl-CoA dioxygenase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TER8_9CHLR
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EFH88517.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Phytanoyl-CoA dioxygenase
PLM3_127_b2_sep16_scaffold_7940_7
RLO_PLX_64_10, Bacteria

Not on your lists

comp(5618..6649)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Fischerella sp. PCC 9339 RepID=UPI00038126AD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_7940_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

6762..8084
DNA (1323bp) protein (441aa)
Alpha-galactosidase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I237_CALAS
melA; alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:BAL99324.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_7940_9
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8110..8970)
DNA (861bp) protein (287aa)
Phytanoyl-CoA dioxygenase Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D1I6_PAESJ
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ACT01850.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
PLM3_127_b2_sep16_scaffold_7940_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9002..9820)
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IC66_PHYMF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_7940_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9922..10935)
DNA (1014bp) protein (338aa)
fatty acid desaturase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002629255
fatty acid desaturase
Tax=RBG_16_Spirochaete_67_19_curated
PLM3_127_b2_sep16_scaffold_7940_12
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11069..12316)
DNA (1248bp) protein (416aa)
peroxidase (EC:1.11.1.7)
Biotin biosynthesis cytochrome P450 Tax=Nitrolancetus hollandicus Lb RepID=I4EKT4_9CHLR
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_7940_13
Caenorhabditis japonica, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(12999..13487)
DNA (489bp) protein (163aa)
Uncharacterized protein (Fragment) Tax=Caenorhabditis japonica RepID=K7HYV3_CAEJA
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA36528b}; Flags: Fragment;; species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis japonica.;"
PLM3_127_b2_sep16_scaffold_7940_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13742..14527)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUG8_HERA2
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_7940_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(14530..15231)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUG7_HERA2
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 15 items

View Taxonomy