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PLM3_127_b2_sep16_scaffold_1286

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1286_1
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)
NADH-quinone oxidoreductase subunit N bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3_127_b2_sep16_scaffold_1286_2
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(403..1986)
DNA (1584bp) protein (528aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH dehydrogenase I subunit M bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_127_b2_sep16_scaffold_1286_3
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(2076..3605)
DNA (1530bp) protein (510aa)
atm:ANT_10460 nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3_127_b2_sep16_scaffold_1286_4
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(3607..5817)
DNA (2211bp) protein (737aa)
NADH dehydrogenase I subunit L bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative NADH-quinone oxidoreductase subunit L
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_1286_5
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(5912..6220)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K 2 Tax=uncultured Chloroflexi bacterium RepID=H5SA71_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
NADH-ubiquinone oxidoreductase chain 4L
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_1286_6
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

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comp(6297..6806)
DNA (510bp) protein (170aa)
NADH dehydrogenase I subunit J bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative NADH-quinone oxidoreductase subunit J
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM3_127_b2_sep16_scaffold_1286_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(6835..8109)
DNA (1275bp) protein (425aa)
atm:ANT_10420 nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_1286_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8187..8546)
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A 1 Tax=uncultured Chloroflexi bacterium RepID=H5SA68_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative NADH-quinone oxidoreductase subunit A
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_1286_9
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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8737..9753
DNA (1017bp) protein (339aa)
atm:ANT_22610 FemAB family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
FemAB family protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_127_b2_sep16_scaffold_1286_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

9746..10879
DNA (1134bp) protein (378aa)
atm:ANT_22600 FemAB family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
FemAB family protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_1286_11
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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10954..11931
DNA (978bp) protein (326aa)
atm:ANT_22590 pyridoxal-phosphate dependent protein; K05396 D-cysteine desulfhydrase [EC:4.4.1.15] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyridoxal-phosphate dependent protein
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_1286_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11938..13407)
DNA (1470bp) protein (490aa)
Putative glycosyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4S6_CALAS
putative glycosyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13628..15334)
DNA (1707bp) protein (569aa)
atm:ANT_23640 putative adenylate/guanylate cyclase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative adenylate/guanylate cyclase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15450..15980)
DNA (531bp) protein (177aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13) bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative ADP-ribose pyrophosphatase (EC:3.6.1.13)
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_1286_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(15959..16711)
DNA (753bp) protein (251aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_1286_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16708..17322)
DNA (615bp) protein (205aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
RNA polymerase ECF-type sigma factor
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17423..19180
DNA (1758bp) protein (586aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F00203
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1286_18
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

19135..19596
DNA (462bp) protein (154aa)
PKD domain containing protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1J2_HERA2
PKD domain-containing protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
PLM3_127_b2_sep16_scaffold_1286_trna_2
unknown

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comp(23156..23228)
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_1286_trna_1
unknown

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comp(23284..23357)
DNA (74bp)
transferRNA Ile
PLM3_127_b2_sep16_scaffold_1286_16S_1
unknown

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comp(23464..24967)
DNA (1504bp)
16S ribosomal RNA (16S rRNA)
PLM3_127_b2_sep16_scaffold_1286_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25309..25857)
DNA (549bp) protein (183aa)
Recombination protein RecR Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3J0_CALAS
recR; recombination protein RecR
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25937..26281)
DNA (345bp) protein (115aa)
Nucleoid-associated protein HGMM_F53H06C05 Tax=uncultured Chloroflexi bacterium RepID=H5SPC2_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_21
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(26294..27859)
DNA (1566bp) protein (522aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III gamma and tau subunits Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ25_ANATU
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3_127_b2_sep16_scaffold_1286_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

27976..28176
DNA (201bp) protein (67aa)
Sec-independent protein translocase protein TatA bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative sec-independent translocation protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(28237..28719)
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X47_SOLUE
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(28804..29559)
DNA (756bp) protein (252aa)
Putative peptidoglycan-binding protein Tax=uncultured bacterium RepID=B3XXI7_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1286_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

29625..30044
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7V8_CHLAD
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 28 items

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