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PLM3_127_b2_sep16_scaffold_1446

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1446_1
RLO_PLX_64_10, Bacteria

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comp(3..758)
DNA (756bp) protein (252aa)
Alpha-galactosidase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I509_CALAS
melA; alpha-galactosidase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_1446_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(763..1632)
DNA (870bp) protein (290aa)
Putative ABC transporter permease protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I510_CALAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM00348.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_1446_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(1634..2626)
DNA (993bp) protein (331aa)
Putative ABC transporter permease protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I511_CALAS
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM00349.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_1446_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(2690..3940)
DNA (1251bp) protein (417aa)
Putative ABC transporter substrate binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I512_CALAS
putative ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAM00350.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_1446_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(3980..5011)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I513_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00351.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_1446_6
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(5014..6048)
DNA (1035bp) protein (345aa)
Amidohydrolase 2 family protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0P5_ANATU
amidohydrolase
Amidohydrolase 2 family protein {ECO:0000313|EMBL:BAJ62440.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3_127_b2_sep16_scaffold_1446_7
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(6067..6870)
DNA (804bp) protein (268aa)
DeoR family transcriptional regulator Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0P6_ANATU
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:BAJ62441.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3_127_b2_sep16_scaffold_1446_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(7066..8454)
DNA (1389bp) protein (463aa)
atm:ANT_00850 trpB; tryptophan synthase beta chain (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8510..8926)
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel Tax=Oceanibaculum indicum P24 RepID=K2JM48_9PROT
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
mscL; large-conductance mechanosensitive channel
PLM3_127_b2_sep16_scaffold_1446_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9045..10754)
DNA (1710bp) protein (570aa)
Diguanylate cyclase with PAS/PAC and GAF sensors Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJM2_9CHRO
diguanylate cyclase with PAS/PAC and GAF sensors
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_11
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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comp(10770..13991)
DNA (3222bp) protein (1074aa)
GAF domain-containing protein Tax=uncultured Chloroflexi bacterium RepID=H5SER7_9CHLR
GAF domain-containing protein {ECO:0000313|EMBL:BAL54653.1}; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
GAF domain-containing protein
PLM3_127_b2_sep16_scaffold_1446_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(14144..15151)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(15199..16224)
DNA (1026bp) protein (342aa)
Putative amidohydrolase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKH6_SINAD
amidohydrolase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_127_b2_sep16_scaffold_1446_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(16297..17751)
DNA (1455bp) protein (485aa)
atm:ANT_11350 hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(17771..18160)
DNA (390bp) protein (130aa)
Histidine kinase Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RRQ7_ASTEC
histidine kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(18157..18534)
DNA (378bp) protein (126aa)
Multi-sensor hybrid histidine kinase Tax=Burkholderia sp. SJ98 RepID=K8R9J3_9BURK
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(18574..18990)
DNA (417bp) protein (139aa)
Hypothetical conserved protein Tax=Bacteria RepID=H1A8J1_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_18
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(19086..19529)
DNA (444bp) protein (148aa)
Nucleotide binding protein, PINc Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAQ1_GEOUR
nucleotide binding protein, PINc
Tax=CG_Solirubrobact_01
PLM3_127_b2_sep16_scaffold_1446_19
unknown

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comp(19526..19876)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1446_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(19983..21077)
DNA (1095bp) protein (365aa)
SpoVR family protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0G6_ISOPI
SpoVR family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(21527..22621)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1II84_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(22652..24163)
DNA (1512bp) protein (504aa)
serine protein kinase PrkA; K07180 serine protein kinase bin=bin1_lowGC species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative serine protein kinase PrkA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(25078..25368)
DNA (291bp) protein (97aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(25457..26104)
DNA (648bp) protein (216aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SKQ4_9ZZZZ
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(26267..27562)
DNA (1296bp) protein (432aa)
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0N3_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_26
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(27601..27996)
DNA (396bp) protein (132aa)
Putative nucleotidyltransferase Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GIE2_9CYAN
DNA polymerase subunit beta
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_1446_27
unknown

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28407..28550
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 27 items

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