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PLM3_127_b2_sep16_scaffold_8063

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8063_1
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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1..615
DNA (615bp) protein (205aa)
ABC-1protein bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3_127_b2_sep16_scaffold_8063_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(612..842)
DNA (231bp) protein (77aa)
hypothetical protein bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_3
unknown

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comp(1655..2215)
DNA (561bp) protein (187aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8063_4
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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2306..3721
DNA (1416bp) protein (472aa)
WD40 domain protein beta Propeller Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3_127_b2_sep16_scaffold_8063_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3810..5267
DNA (1458bp) protein (486aa)
Collagenase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZU8_9ACTO
collagenase
Collagenase {ECO:0000313|EMBL:AGZ41245.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_127_b2_sep16_scaffold_8063_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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5478..8660
DNA (3183bp) protein (1061aa)
glyA_gcvT; serine hydroxymethyltransferase / aminomethyltransferase (EC:2.1.2.10 2.1.2.1)
Aminomethyltransferase bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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8736..9362
DNA (627bp) protein (209aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phosphoglycerate/bisphosphoglycerate mutase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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9523..11574
DNA (2052bp) protein (684aa)
AAA ATPase central domain protein Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CS54_PAESJ
ATPase AAA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(11628..12947)
DNA (1320bp) protein (440aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(13122..14237)
DNA (1116bp) protein (372aa)
Uncharacterized protein Tax=Yersinia enterocolitica RepID=L0RQS3_YEREN
Rhs element Vgr family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(14485..15957)
DNA (1473bp) protein (491aa)
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 bin=GWB2_Chloroflexi_54_36 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(16011..17318)
DNA (1308bp) protein (436aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(17297..17659)
DNA (363bp) protein (121aa)
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
glycine cleavage system H protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18017..19099)
DNA (1083bp) protein (361aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMQ7_9CHLR
Alanine racemase {ECO:0000313|EMBL:EFH87057.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3_127_b2_sep16_scaffold_8063_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

19386..20813
DNA (1428bp) protein (476aa)
atm:ANT_28290 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

20777..20959
DNA (183bp) protein (61aa)
Citrate transporter superfamily Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLB5_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

21101..22201
DNA (1101bp) protein (367aa)
Queuine tRNA-ribosyltransferase bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
tgt; queuine tRNA-ribosyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_18
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

22224..23054
DNA (831bp) protein (277aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase bin=GWB2_Chloroflexi_54_36 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3_127_b2_sep16_scaffold_8063_19
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(23550..24413)
DNA (864bp) protein (288aa)
Major facilitator superfamily MFS_1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXN0_HERA2
major facilitator superfamily transporter
Tax=BJP_IG2158_Anaerolineales_38_74
PLM3_127_b2_sep16_scaffold_8063_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(24491..25165)
DNA (675bp) protein (225aa)
trkA; potassium uptake protein; K03499 trk system potassium uptake protein TrkA bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
trkA-N domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_8063_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(25168..25485)
DNA (318bp) protein (106aa)
Putative Trk system potassium uptake protein trkA (K(+)-uptake protein trkA) bin=GWB2_Chloroflexi_54_36 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Trk system potassium uptake protein trkA (K(+)-uptake protein trkA)
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 21 items

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