ggKbase home page

PLM3_127_b2_sep16_scaffold_9688

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9688_1
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

1..381
DNA (381bp) protein (127aa)
Octanoyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M2F0_9FIRM bin=RBG9 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
lipoate-protein ligase B
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_9688_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(445..1071)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Bacillus sp. 123MFChir2 RepID=UPI00037345DD
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_3
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1075..3348)
DNA (2274bp) protein (758aa)
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase {ECO:0000313|EMBL:ABY36206.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABY36206.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
Xanthine dehydrogenase Tax=Chloroflexus RepID=A9WGP0_CHLAA
PLM3_127_b2_sep16_scaffold_9688_4
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

3478..4434
DNA (957bp) protein (319aa)
atm:ANT_25960 lipA; lipoate synthase (EC:2.8.1.-); K03644 lipoic acid synthetase [EC:2.8.1.8] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
lipA; lipoate synthase (EC:2.8.1.-)
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_127_b2_sep16_scaffold_9688_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4431..5000
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFX4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27561.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_9688_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(5081..5827)
DNA (747bp) protein (249aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4I5_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

6159..6767
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BH84_MEISD
TetR family transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

6834..7802
DNA (969bp) protein (323aa)
Phenylacetate-CoA oxygenase, PaaG subunit Tax=Fulvivirga imtechensis AK7 RepID=L8JKY6_9BACT
paaA; ATPase AAA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

7841..8155
DNA (315bp) protein (105aa)
Phenylacetic acid degradation B bin=GWA2_Ignavibacteria_55_11 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
phenylacetic acid degradation B
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_10
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8152..8859
DNA (708bp) protein (236aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI0003696A68
Phenylacetate-CoA oxygenase, PaaI subunit {ECO:0000313|EMBL:ELR69598.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
phenylacetate-CoA oxygenase
PLM3_127_b2_sep16_scaffold_9688_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8939..9430
DNA (492bp) protein (164aa)
phenylacetate-CoA oxygenase
phenylacetate-CoA oxygenase, paaj subunit; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:AIZ64224.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
PLM3_127_b2_sep16_scaffold_9688_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(9452..10183)
DNA (732bp) protein (244aa)
Putative acyltransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2W2_ANATU
putative acyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_9688_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

10347..10718
DNA (372bp) protein (124aa)
Pyridoxamine 5'-phosphate oxidase-related fmn-binding protein Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MXG2_9ACTO
pyridoxamine 5'-phosphate oxidase-related fmn-binding protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_127_b2_sep16_scaffold_9688_14
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

10715..11311
DNA (597bp) protein (199aa)
atm:ANT_04140 ATP-dependent Clp protease ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ATP-dependent Clp protease ATP-binding subunit
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3_127_b2_sep16_scaffold_9688_15
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

11325..11795
DNA (471bp) protein (157aa)
atm:ANT_04140 ATP-dependent Clp protease ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ATP-dependent Clp protease ATP-binding subunit
Tax=RBG_16_Chloroflexi_64_43_curated
Displaying 15 items

View Taxonomy