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PLM3_127_b2_sep16_scaffold_9841

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9841_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..576
DNA (576bp) protein (192aa)
hypothetical protein Tax=Salisaeta longa RepID=UPI0003B6FF0B
transcriptional regulator
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM3_127_b2_sep16_scaffold_9841_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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609..1094
DNA (486bp) protein (162aa)
Helix-turn-helix domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G1_GEOUR
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABQ28079.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3_127_b2_sep16_scaffold_9841_3
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(965..1291)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Laceyella sacchari RepID=UPI0003B4B795
TIM-barrel enzyme, possibly a dioxygenase
Tax=BJP_IG2069_Anaerolineales_43_63
PLM3_127_b2_sep16_scaffold_9841_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(1497..1919)
DNA (423bp) protein (141aa)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_9841_5
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1977..2489)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Laceyella sacchari RepID=UPI0003B3121E
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11838.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_9841_6
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(2513..3160)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Laceyella sacchari RepID=UPI0003B3121E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM20778.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
PLM3_127_b2_sep16_scaffold_9841_7
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3153..3761)
DNA (609bp) protein (203aa)
Putative sugar phosphate isomerase/epimerase Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCN9_HALJB
putative sugar phosphate isomerase/epimerase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_9841_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4018..5076)
DNA (1059bp) protein (353aa)
ABC transporter ATP-binding protein Tax=Rhizobium leguminosarum RepID=UPI00038263F1
ABC transporter ATP-binding protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_9841_9
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5073..6179)
DNA (1107bp) protein (369aa)
ABC transporter related Tax=Sinorhizobium medicae (strain WSM419) RepID=A6ULM6_SINMW
ABC transporter-like protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_9841_10
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6182..7186)
DNA (1005bp) protein (335aa)
ABC-type transporter, integral membrane subunit Tax=Rhizobium sp. PDO1-076 RepID=H4FBK9_9RHIZ
ABC trans-affinity zinc uptake system membrane protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_127_b2_sep16_scaffold_9841_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7190..8140)
DNA (951bp) protein (317aa)
ABC transporter permease Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B39F31
ABC transporter permease y4oQ
Tax=RBG_16_Spirochaete_67_19_curated
PLM3_127_b2_sep16_scaffold_9841_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8365..9378)
DNA (1014bp) protein (338aa)
Extracellular solute-binding protein family 1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBK9_MESCW
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:CDX32884.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC transporter periplasmic protein
PLM3_127_b2_sep16_scaffold_9841_13
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9375..9698)
DNA (324bp) protein (108aa)
UPI0003CE94AA related cluster Tax=unknown RepID=UPI0003CE94AA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ08783.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
sugar ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_9841_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9874..10572)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000380883D
Transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ERM91056.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
PLM3_127_b2_sep16_scaffold_9841_15
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

10692..11489
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMC7_ROSCS
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABU58689.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3_127_b2_sep16_scaffold_9841_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11582..12565
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQ88_ROSS1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ88791.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_127_b2_sep16_scaffold_9841_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12706..13140
DNA (435bp) protein (145aa)
transposase IS200 Tax=Fischerella muscicola RepID=UPI0002E66D35
transposase IS200-family protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 17 items

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