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PLM3_127_b2_sep16_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1038_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..322)
DNA (321bp) protein (107aa)
NLP/P60 protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QG97_CATAD
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACU72942.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_127_b2_sep16_scaffold_1038_2
Candida glabrata, Nakaseomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(616..1440)
DNA (825bp) protein (275aa)
PREDICTED: LOW QUALITY PROTEIN: trans-Golgi network integral membrane protein 2-like Tax=Equus caballus RepID=UPI0003ACCCA0
Collagen alpha-2(I) chain
Strain CBS138 chromosome J complete sequence {ECO:0000313|EMBL:CAG60764.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; Nakaseomyces/Candida clade.;" source="Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /; NRRL Y-65) (Yeast) (Torulopsis glabrata).;"
PLM3_127_b2_sep16_scaffold_1038_3
unknown

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comp(1464..2687)
DNA (1224bp) protein (408aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_4
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3344..4303
DNA (960bp) protein (320aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
Signal transduction histidine kinase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q390_9FIRM
histidine kinase
PLM3_127_b2_sep16_scaffold_1038_5
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4396..5001)
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F2L8_9NOCA
Transcriptional regulator {ECO:0000313|EMBL:KIA65214.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1038_6
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5072..5644)
DNA (573bp) protein (191aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
ATP-dependent Clp protease proteolytic subunit Tax=Clostridium sp. CAG:138 RepID=R6AUY0_9CLOT
ATP-dependent Clp protease, proteolytic subunit ClpP
PLM3_127_b2_sep16_scaffold_1038_7
unknown

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5805..6170
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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6590..7468
DNA (879bp) protein (293aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] bin=bin8_Chloro species=Isoptericola variabilis genus=Isoptericola taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cytochrome c oxidase subunit II
Tax=CSP1_4_Chloroflexi
PLM3_127_b2_sep16_scaffold_1038_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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7488..9158
DNA (1671bp) protein (557aa)
ctaD; cytochrome c oxidase, subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I Tax=Rhodococcus erythropolis RepID=Q3L9E6_RHOE4
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_127_b2_sep16_scaffold_1038_10
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9263..9745
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Bacillus sp. EGD-AK10 RepID=U2A9M1_9BACI
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM3_127_b2_sep16_scaffold_1038_11
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9745..10278
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VVI2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETA07769.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans CGMCC 6845.;"
conserved hypothetical protein, DUF2587 superfamily
PLM3_127_b2_sep16_scaffold_1038_12
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10289..11758)
DNA (1470bp) protein (490aa)
Menaquinol-cytochrome c reductase cytochrome b subunit Tax=Frankia sp. (strain CcI3) RepID=Q2JA36_FRASC
Menaquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:KJE77603.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
cytochrome b/b6-like protein
PLM3_127_b2_sep16_scaffold_1038_13
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11755..12657)
DNA (903bp) protein (301aa)
Rieske (2Fe-2S) domain protein Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M192_ACIFD
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACU54740.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
PLM3_127_b2_sep16_scaffold_1038_14
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(12692..13468)
DNA (777bp) protein (259aa)
Cytochrome c class I Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M193_ACIFD
cytochrome c class I
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM3_127_b2_sep16_scaffold_1038_15
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13625..14422
DNA (798bp) protein (266aa)
Putative tryptophan 2,3-dioxygenase Tax=mine drainage metagenome RepID=E6PIA2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KES06111.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
tryptophan 23-dioxygenase
PLM3_127_b2_sep16_scaffold_1038_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

14570..15532
DNA (963bp) protein (321aa)
Aldo/keto reductase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR92_RUBXD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABG06086.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_127_b2_sep16_scaffold_1038_17
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15597..16604
DNA (1008bp) protein (336aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI000375823C
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_127_b2_sep16_scaffold_1038_18
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16619..17839)
DNA (1221bp) protein (407aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
arcA; arginine deiminase (EC:3.5.3.6)
arginine deiminase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262792F
PLM3_127_b2_sep16_scaffold_1038_19
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17965..18399
DNA (435bp) protein (145aa)
hypothetical protein Tax=Thermus igniterrae RepID=UPI00036F3025
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH39555.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus JL-18.;"
PLM3_127_b2_sep16_scaffold_1038_20
unknown

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comp(18457..18900)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_21
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18994..19191)
DNA (198bp) protein (66aa)
LuxR family transcriptional regulator Tax=Actinoplanes globisporus RepID=UPI000380BD20
putative two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAL90541.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_127_b2_sep16_scaffold_1038_22
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19385..20116)
DNA (732bp) protein (244aa)
Signal transduction histidine kinase Tax=Saccharomonospora cyanea NA-134 RepID=H5XCY8_9PSEU
Signal transduction histidine kinase {ECO:0000313|EMBL:EHR62385.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1038_23
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21278..21832
DNA (555bp) protein (185aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI000368A844
Uncharacterized protein {ECO:0000313|EMBL:KIZ15616.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
transposase
PLM3_127_b2_sep16_scaffold_1038_24
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21865..22389
DNA (525bp) protein (175aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI0003701260
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY94015.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_127_b2_sep16_scaffold_1038_25
unknown

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comp(22528..22653)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_26
unknown

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23285..23449
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_27
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

23449..23934
DNA (486bp) protein (162aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N591_ANATU
hypothetical protein
Tax=RBG_13_Chloroflexi_46_14_curated
PLM3_127_b2_sep16_scaffold_1038_28
Streptomyces sp. SANK 62799, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23931..25376
DNA (1446bp) protein (482aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15)
Putative alpha,alpha-trehalose-phosphate synthase Tax=Streptomyces sp. SANK 62799 RepID=E1CG67_9ACTO
Putative alpha,alpha-trehalose-phosphate synthase {ECO:0000313|EMBL:BAJ19081.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SANK 62799.;"
PLM3_127_b2_sep16_scaffold_1038_29
unknown

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25373..25786
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1038_30
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25931..26110)
DNA (180bp) protein (60aa)
Cold-shock DNA-binding domain protein Tax=Isoptericola variabilis (strain 225) RepID=F6FR86_ISOV2
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEG42946.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
Displaying items 1-30 of 41 in total

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