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PLM3_127_b2_sep16_scaffold_3

Search features with annotation key words

Displaying items 31-60 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3_31
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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31512..32591
DNA (1080bp) protein (360aa)
Membrane protein Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CZ58_THEYO
Membrane protein {ECO:0000313|EMBL:ERM93257.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
basic membrane protein family protein
PLM3_127_b2_sep16_scaffold_3_32
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

32658..34235
DNA (1578bp) protein (526aa)
Nucleoside ABC transporter ATP-binding protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM70_THEM7
nucleoside ABC transporter ATP-binding protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_127_b2_sep16_scaffold_3_33
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34284..35465
DNA (1182bp) protein (394aa)
Inner-membrane translocator Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM71_THEM7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADU51430.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM3_127_b2_sep16_scaffold_3_34
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

35458..36363
DNA (906bp) protein (302aa)
Putative sugar ABC transporter, permease protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABW9_CARHZ
sugar ABC transporter permease
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:ABB15627.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
PLM3_127_b2_sep16_scaffold_3_35
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

36471..37934
DNA (1464bp) protein (488aa)
Pyruvate kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIL5_ANADF
pyruvate kinase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM3_127_b2_sep16_scaffold_3_36
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38036..38584
DNA (549bp) protein (183aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000365955B
Uncharacterized protein {ECO:0000313|EMBL:EWT04283.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
PLM3_127_b2_sep16_scaffold_3_37
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38684..39499
DNA (816bp) protein (272aa)
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Hydroxypyruvate isomerase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7L2_GEOOG
PLM3_127_b2_sep16_scaffold_3_38
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39534..41312
DNA (1779bp) protein (593aa)
Glyoxylate carboligase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WHR3_9ACTO
Glyoxylate carboligase {ECO:0000313|EMBL:EFL21315.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
glyoxylate carboligase
PLM3_127_b2_sep16_scaffold_3_39
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41335..42489)
DNA (1155bp) protein (385aa)
allantoicase (EC:3.5.3.4)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
hypothetical protein Tax=Actinopolyspora mortivallis RepID=UPI000374C032
PLM3_127_b2_sep16_scaffold_3_40
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42486..43619)
DNA (1134bp) protein (378aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:ADG89293.1}; EC=2.7.1.31 {ECO:0000313|EMBL:ADG89293.1};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Glycerate kinase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y598_THEBD
PLM3_127_b2_sep16_scaffold_3_41
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43633..43971)
DNA (339bp) protein (113aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
5-hydroxyisourate hydrolase Tax=Sorangium cellulosum So0157-2 RepID=S4XQ05_SORCE
5-hydroxyisourate hydrolase
PLM3_127_b2_sep16_scaffold_3_42
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(43968..44480)
DNA (513bp) protein (171aa)
Probable allantoicase Tax=Sorangium cellulosum So0157-2 RepID=S4Y359_SORCE
OHCU decarboxylase
OHCU decarboxylase {ECO:0000313|EMBL:AHG89680.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3_43
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44477..45781)
DNA (1305bp) protein (435aa)
hydroxydechloroatrazine ethylaminohydrolase (EC:3.5.99.3)
Amidohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS78_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:KIE50405.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
PLM3_127_b2_sep16_scaffold_3_44
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45855..47141)
DNA (1287bp) protein (429aa)
Xanthine permease Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK08_NAKMY
pbuX: xanthine permease
PbuX: xanthine permease {ECO:0000313|EMBL:AHY48202.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_127_b2_sep16_scaffold_3_45
unknown

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47315..47425
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3_46
unknown

Not on your lists

47468..47602
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3_47
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47871..48713)
DNA (843bp) protein (281aa)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Uricase Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZVW7_DEIPD
urate oxidase
PLM3_127_b2_sep16_scaffold_3_48
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48800..51118)
DNA (2319bp) protein (773aa)
carbon-monoxide dehydrogenase Tax=Amycolatopsis balhimycina RepID=UPI00035FFB37
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KIE50508.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
carbon-monoxide dehydrogenase large subunit
PLM3_127_b2_sep16_scaffold_3_49

Not on your lists

comp(51105..51620)
DNA (516bp) protein (172aa)
Aldehyde oxidoreductase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X6F5_STRPR
Xanthine dehydrogenase iron-sulfur-binding subunit {ECO:0000313|EMBL:KGA11994.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3_50
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51617..52456)
DNA (840bp) protein (280aa)
putative xanthine dehydrogenase FAD-binding subunit (EC:1.17.1.4)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036F4F3D
Uncharacterized protein {ECO:0000313|EMBL:KIE51466.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
PLM3_127_b2_sep16_scaffold_3_51
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52466..53365)
DNA (900bp) protein (300aa)
2-hydroxy-3-oxopropionate reductase Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AXC8_NOCDD
2-hydroxy-3-oxopropionate reductase
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ADH66002.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3_127_b2_sep16_scaffold_3_52
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53710..54453)
DNA (744bp) protein (248aa)
Transcriptional regulator, IclR family Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KCM7_SACES
Transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCH34358.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_127_b2_sep16_scaffold_3_53
unknown

Not on your lists

comp(54622..54720)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3_54
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54837..56402)
DNA (1566bp) protein (522aa)
Uncharacterized protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9S2_METNO
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ48669.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3_55
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56796..57584
DNA (789bp) protein (263aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000369DD48
membrane protein
Candidate membrane protein {ECO:0000313|EMBL:AEG93836.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_127_b2_sep16_scaffold_3_56
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(57618..57830)
DNA (213bp) protein (71aa)
Putative transmembrane anti-sigma factor Tax=Frankia sp. (strain EuI1c) RepID=E3J9T5_FRASU
transmembrane anti-sigma factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_3_57
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58080..59639
DNA (1560bp) protein (520aa)
BNR repeat-like domain protein Tax=Burkholderia thailandensis RepID=N0AN76_BURTH
BNR repeat-like domain protein {ECO:0000313|EMBL:KHD22771.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
BNR repeat-like domain protein
PLM3_127_b2_sep16_scaffold_3_58
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59874..61511)
DNA (1638bp) protein (546aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IL45_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KJS61882.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
BNR/Asp-box repeat-containing protein
PLM3_127_b2_sep16_scaffold_3_59
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61778..62350)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00036735BF
Putative uncharacterized protein {ECO:0000313|EMBL:EFL03159.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3_60
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62347..63270)
DNA (924bp) protein (308aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Protease HtpX homolog Tax=Frankia sp. (strain EAN1pec) RepID=A8L5F2_FRASN
heat shock protein HtpX
Displaying items 31-60 of 220 in total

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